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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Pitx3 paired-like homeodomain transcription factor 3 MGI:1100498 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs37273972 MPD | dbSNP | MGI SNP Detail | Chr19:46208346 | f | Elovl3 : Intron Pitx3 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | |||||
| rs36573705 MPD | dbSNP | MGI SNP Detail | Chr19:46208412 | f | Elovl3 : Intron Pitx3 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||||
| rs38282494 MPD | dbSNP | MGI SNP Detail | Chr19:46208487 | f | Elovl3 : Intron Pitx3 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | |||||
| rs36714677 MPD | dbSNP | MGI SNP Detail | Chr19:46208511 | f | Elovl3 : Coding-NonSynonymous Pitx3 : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||||
| rs37985391 MPD | dbSNP | MGI SNP Detail | Chr19:46208594 | f | Elovl3 : Coding-NonSynonymous Pitx3 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||||
| rs36569093 MPD | dbSNP | MGI SNP Detail | Chr19:46210387 | f | Elovl3 : Locus-Region Pitx3 : mRNA-UTR | 1 | SNP | A | C | A/C | |||||||||||||||||
| rs36277350 MPD | dbSNP | MGI SNP Detail | Chr19:46211072 | f | Pitx3 : Coding-Synonymous | 1 | SNP | T | G | T | G | G/T | |||||||||||||||
| rs4232227 MPD | dbSNP | MGI SNP Detail | Chr19:46211327 | r | Pitx3 : Intron | 1 | SNP | C | C | C | C | C | T | C | C/T | ||||||||||||
| rs4232226 MPD | dbSNP | MGI SNP Detail | Chr19:46211426 | r | Pitx3 : Intron | 1 | SNP | C | C | C | C | C | G | C | C/G | ||||||||||||
| rs4232225 MPD | dbSNP | MGI SNP Detail | Chr19:46211438 | r | Pitx3 : Intron | 1 | SNP | C | C | C | C | C | C | A | A/C | ||||||||||||
| rs4232224 MPD | dbSNP | MGI SNP Detail | Chr19:46211451 | r | Pitx3 : Intron | 1 | SNP | C | C | C | C | C | A | C | A/C | ||||||||||||
| rs4232223 MPD | dbSNP | MGI SNP Detail | Chr19:46211521 | r | Pitx3 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | G | C | C/G | ||||||||||||
| rs37014284 MPD | dbSNP | MGI SNP Detail | Chr19:46211605 | f | Pitx3 : Coding-Synonymous | 1 | SNP | T | C | T | C/T | ||||||||||||||||
| rs37091521 MPD | dbSNP | MGI SNP Detail | Chr19:46212287 | f | Pitx3 : Intron | 1 | SNP | G | A | G | G | A | A/G | ||||||||||||||
| rs30322746 MPD | dbSNP | MGI SNP Detail | Chr19:46213949 | f | Pitx3 : Intron | 1 | SNP | A | C | C | C | A/C | |||||||||||||||
| rs38650913 MPD | dbSNP | MGI SNP Detail | Chr19:46213972 | f | Pitx3 : Intron | 1 | SNP | T | A | T | T | A | A/T | ||||||||||||||
| rs36379555 MPD | dbSNP | MGI SNP Detail | Chr19:46214744 | f | Pitx3 : Intron | 1 | SNP | T | C | T | T | C | C/T | ||||||||||||||
| rs30370492 MPD | dbSNP | MGI SNP Detail | Chr19:46215058 | f | Pitx3 : Intron | 1 | SNP | G | A | A | A/G | ||||||||||||||||
| rs37952455 MPD | dbSNP | MGI SNP Detail | Chr19:46215464 | f | Pitx3 : Intron | 1 | SNP | G | A | G | A | A/G | |||||||||||||||
| rs36483156 MPD | dbSNP | MGI SNP Detail | Chr19:46215695 | f | Pitx3 : Intron | 1 | SNP | C | T | C | C | T | C/T | ||||||||||||||
| rs31011012 MPD | dbSNP | MGI SNP Detail | Chr19:46216503 | f | Pitx3 : Intron | 1 | SNP | C | A | A | A | A | A/C | ||||||||||||||
| rs38178827 MPD | dbSNP | MGI SNP Detail | Chr19:46217297 | f | Pitx3 : Intron | 1 | SNP | A | A | A | A | G | A/G | ||||||||||||||
| rs38567863 MPD | dbSNP | MGI SNP Detail | Chr19:46217766 | f | Pitx3 : Intron | 1 | SNP | G | A | G | G | A | A/G | ||||||||||||||
| rs36321592 MPD | dbSNP | MGI SNP Detail | Chr19:46218469 | f | Pitx3 : Intron | 1 | SNP | T | G | T | T | G | G/T | ||||||||||||||
| rs37679956 MPD | dbSNP | MGI SNP Detail | Chr19:46218501 | f | Pitx3 : Intron | 1 | SNP | T | A | T | T | A | A/T | ||||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs37092269 MPD | dbSNP | MGI SNP Detail | Chr19:46219069 | f | Pitx3 : Intron | 1 | SNP | A | G | A | A | G | A/G | ||||||||||||||
| rs36750264 MPD | dbSNP | MGI SNP Detail | Chr19:46219483 | f | Pitx3 : Intron | 1 | SNP | C | C | T | C | C | T | C/T | |||||||||||||
| rs37322056 MPD | dbSNP | MGI SNP Detail | Chr19:46220323 | f | Pitx3 : Intron | 1 | SNP | C | T | C | C | T | C/T | ||||||||||||||
| rs39443341 MPD | dbSNP | MGI SNP Detail | Chr19:46220566 | f | Pitx3 : Intron | 1 | SNP | G | G | G | G | G | A | A/G | |||||||||||||
| rs36392849 MPD | dbSNP | MGI SNP Detail | Chr19:46221591 | f | Pitx3 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | C | T | C/T | ||||||||
| rs39297834 MPD | dbSNP | MGI SNP Detail | Chr19:46221821 | f | Pitx3 : Intron | 1 | SNP | A | G | A | A | A | G | A | A | G | G | A/G | |||||||||
| rs36925996 MPD | dbSNP | MGI SNP Detail | Chr19:46222202 | f | Pitx3 : Intron | 1 | SNP | C | G | C | G | C | G | C | C | G | G | C/G | |||||||||
| rs38322339 MPD | dbSNP | MGI SNP Detail | Chr19:46222337 | f | Pitx3 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | A | C | A/C | |||||||||
| rs36440159 MPD | dbSNP | MGI SNP Detail | Chr19:46222417 | f | Pitx3 : Intron | 1 | SNP | G | C | G | G | C | G | G | C | C | C/G | ||||||||||
| rs37030345 MPD | dbSNP | MGI SNP Detail | Chr19:46222735 | f | Pitx3 : mRNA-UTR | 1 | SNP | C | C | C | T | C | C | T | C | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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