About   Help   FAQ
Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Pitx3
paired-like homeodomain transcription factor 3
MGI:1100498

61 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs37273972
MPD | dbSNP | MGI SNP Detail
Chr19:46133856f 1SNPCT CCCCCCCCCCCC       C/T
rs36573705
MPD | dbSNP | MGI SNP Detail
Chr19:46133922f 1SNPGA GGGGGGGGGGGGG      A/G
rs38282494
MPD | dbSNP | MGI SNP Detail
Chr19:46133997f 1SNPCT CCCCCCCCCCCC       C/T
rs36714677
MPD | dbSNP | MGI SNP Detail
Chr19:46134021f 1SNPTC TTTTTTTTTTTTT      C/T
rs37985391
MPD | dbSNP | MGI SNP Detail
Chr19:46134104f 1SNPGA GGGGGGGGGGGGG      A/G
rs50731697
MPD | dbSNP | MGI SNP Detail
Chr19:46134325f 2SNPA     A          GG   A/G
rs216336196
MPD | dbSNP | MGI SNP Detail
Chr19:46135726f 1SNP                 CC   C
rs36569093
MPD | dbSNP | MGI SNP Detail
Chr19:46135897f 1SNP       CA             A/C
rs233387956
MPD | dbSNP | MGI SNP Detail
Chr19:46135941f 1SNP                 AA   A
rs36277350
MPD | dbSNP | MGI SNP Detail
Chr19:46136582f 3SNPG      TGGT     GTT   G/T
rs4232227
MPD | dbSNP | MGI SNP Detail
Chr19:46136837r 1SNPCCCC  C            TC C/T
rs4232226
MPD | dbSNP | MGI SNP Detail
Chr19:46136943r 1SNPCCCC  C            GC C/G
rs4232225
MPD | dbSNP | MGI SNP Detail
Chr19:46136948r 3SNPCCCC  C         CACCA A/C
rs4232224
MPD | dbSNP | MGI SNP Detail
Chr19:46136961r 1SNPCCCC  C            AC A/C
rs4232223
MPD | dbSNP | MGI SNP Detail
Chr19:46137031r 1SNPCCCC  C            GC C/G
rs37014284
MPD | dbSNP | MGI SNP Detail
Chr19:46137115f 1SNP       CTT            C/T
rs50820876
MPD | dbSNP | MGI SNP Detail
Chr19:46137345f 1SNPC     C         C    TC/T
rs48084471
MPD | dbSNP | MGI SNP Detail
Chr19:46137667f 1SNPA               A    TA/T
rs37091521
MPD | dbSNP | MGI SNP Detail
Chr19:46137797f 1SNP       GAAG  G        A/G
rs247193096
MPD | dbSNP | MGI SNP Detail
Chr19:46137915f 1SNP                 TT   T
rs257487493
MPD | dbSNP | MGI SNP Detail
Chr19:46138168f 1SNP                 TT   T
rs221535671
MPD | dbSNP | MGI SNP Detail
Chr19:46138427f 1SNP                 CC   C
rs237294119
MPD | dbSNP | MGI SNP Detail
Chr19:46138453f 1SNP                 GG   G
rs30322746
MPD | dbSNP | MGI SNP Detail
Chr19:46139459f 3SNPC C       A     CAA   A/C
rs38650913
MPD | dbSNP | MGI SNP Detail
Chr19:46139482f 1SNP       TAAT  T        A/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs36379555
MPD | dbSNP | MGI SNP Detail
Chr19:46140254f 2SNP       TCCT  T   TT   C/T
rs30370492
MPD | dbSNP | MGI SNP Detail
Chr19:46140568f 3SNPA A       G      GG   A/G
rs37952455
MPD | dbSNP | MGI SNP Detail
Chr19:46140974f 2SNP       GAAG      GG   A/G
rs36483156
MPD | dbSNP | MGI SNP Detail
Chr19:46141205f 1SNP       CTTC  C        C/T
rs31011012
MPD | dbSNP | MGI SNP Detail
Chr19:46142013f 3SNPA A   A   C     ACC   A/C
rs255065358
MPD | dbSNP | MGI SNP Detail
Chr19:46142671f 1SNP                 TT   T
rs38178827
MPD | dbSNP | MGI SNP Detail
Chr19:46142807f 1SNP       AAGA  A        A/G
rs38567863
MPD | dbSNP | MGI SNP Detail
Chr19:46143276f 1SNP       GAAG  G        A/G
rs36321592
MPD | dbSNP | MGI SNP Detail
Chr19:46143979f 1SNP       TGGT  T        G/T
rs37679956
MPD | dbSNP | MGI SNP Detail
Chr19:46144011f 1SNP      TTAA   T        A/T
rs37092269
MPD | dbSNP | MGI SNP Detail
Chr19:46144579f 1SNP       AGGA  A        A/G
rs261945596
MPD | dbSNP | MGI SNP Detail
Chr19:46144873f 1SNP                 GG   G
rs36750264
MPD | dbSNP | MGI SNP Detail
Chr19:46144993f 1SNP      CCTTC  C        C/T
rs223502484
MPD | dbSNP | MGI SNP Detail
Chr19:46145427f 1SNP                 TT   T
rs247376608
MPD | dbSNP | MGI SNP Detail
Chr19:46145773f 1SNP                 GG   G
rs37322056
MPD | dbSNP | MGI SNP Detail
Chr19:46145833f 1SNP       CTTC  C        C/T
rs39443341
MPD | dbSNP | MGI SNP Detail
Chr19:46146076f 1SNP      GGGAG  G        A/G
rs216373912
MPD | dbSNP | MGI SNP Detail
Chr19:46146791f 1SNP                 GG   G
rs36392849
MPD | dbSNP | MGI SNP Detail
Chr19:46147101f 1SNP T  T TTCCTTTT T      C/T
rs39297834
MPD | dbSNP | MGI SNP Detail
Chr19:46147331f 2SNP A  A GAGGA AA G AA   A/G
rs36925996
MPD | dbSNP | MGI SNP Detail
Chr19:46147712f 2SNP G  C GCGGC CC G CC   C/G
rs214864770
MPD | dbSNP | MGI SNP Detail
Chr19:46147765f 1SNP                 TT   T
rs38322339
MPD | dbSNP | MGI SNP Detail
Chr19:46147847f 1SNP C  C CCAAC CC C      A/C
rs36440159
MPD | dbSNP | MGI SNP Detail
Chr19:46147927f 1SNP    G CGCCG GG C      C/G
rs37030345
MPD | dbSNP | MGI SNP Detail
Chr19:46148245f 1SNP    C CCTT  CC C      C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs237320618
MPD | dbSNP | MGI SNP Detail
Chr19:46148365f 1SNP                 TC   C/T
rs52550344
MPD | dbSNP | MGI SNP Detail
Chr19:46148443f 1SNPC     C               C
rs262146507
MPD | dbSNP | MGI SNP Detail
Chr19:46148446f 1SNP                 CT   C/T
rs221933518
MPD | dbSNP | MGI SNP Detail
Chr19:46148474f 1SNP                 CC   C
rs36819625
MPD | dbSNP | MGI SNP Detail
Chr19:46149366f 2SNP G  T GTGGT TT G TT   G/T
rs39246765
MPD | dbSNP | MGI SNP Detail
Chr19:46149636f 2SNP G  A GAGGA AA G AA   A/G
rs222755332
MPD | dbSNP | MGI SNP Detail
Chr19:46149708f 1SNP                 CC   C
rs241323156
MPD | dbSNP | MGI SNP Detail
Chr19:46149713f 1SNP                 CC   C
rs263282756
MPD | dbSNP | MGI SNP Detail
Chr19:46149720f 1SNP                 AC   A/C
rs37878269
MPD | dbSNP | MGI SNP Detail
Chr19:46149800f 1SNP C  C CCGGCCCC C      C/G
rs223323387
MPD | dbSNP | MGI SNP Detail
Chr19:46150053f 1SNP                 AA   A

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/17/2016
MGI 6.03
The Jackson Laboratory