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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Sgca
sarcoglycan, alpha (dystrophin-associated glycoprotein)
MGI:894698

153 matching SNPs displayed
Full result set is also available in a tab-delimited format.
Include SNPs that map to multiple locations

Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs48242147
MPD | dbSNP | MGI SNP Detail
Chr11:94960844f 1SNP      C         T   C/T
rs50345309
MPD | dbSNP | MGI SNP Detail
Chr11:94961009f 1SNP      C             C
rs51436237
MPD | dbSNP | MGI SNP Detail
Chr11:94961022f 1SNP      A         G   A/G
rs47690296
MPD | dbSNP | MGI SNP Detail
Chr11:94961080f 1SNPA     G         A   A/G
rs50351162
MPD | dbSNP | MGI SNP Detail
Chr11:94961089f 1SNPT     G         T   G/T
rs46823417
MPD | dbSNP | MGI SNP Detail
Chr11:94961144f 1SNPA     G         A   A/G
rs46536817
MPD | dbSNP | MGI SNP Detail
Chr11:94961182f 2SNPA     G         AAG A/G
rs49914915
MPD | dbSNP | MGI SNP Detail
Chr11:94961194f 2SNPA     G         AAG A/G
rs45992326
MPD | dbSNP | MGI SNP Detail
Chr11:94961281f 2SNPA     G         AAG A/G
rs233443491
MPD | dbSNP | MGI SNP Detail
Chr11:94961720f 1SNP                 GC C/G
rs29471080
MPD | dbSNP | MGI SNP Detail
Chr11:94961902f 2SNPG G   A         G   A/G
rs29391370
MPD | dbSNP | MGI SNP Detail
Chr11:94961910f 1SNPG G   A         G   A/G
rs52359623
MPD | dbSNP | MGI SNP Detail
Chr11:94962118f 2SNPG     A         GGA A/G
rs29466222
MPD | dbSNP | MGI SNP Detail
Chr11:94962190f 3SNPC C   T   C     CCT C/T
rs27060307
MPD | dbSNP | MGI SNP Detail
Chr11:94962210f 3SNPAGAA  GA GAAAAAAAAG A/G
rs29457541
MPD | dbSNP | MGI SNP Detail
Chr11:94962213f 3SNPG G   T   G     GGT G/T
rs27060306
MPD | dbSNP | MGI SNP Detail
Chr11:94962428f 2SNPAG A GGA GAAAAAA AG A/G
rs29392073
MPD | dbSNP | MGI SNP Detail
Chr11:94962444f 3SNPT T   C   T      TC C/T
rs27060305
MPD | dbSNP | MGI SNP Detail
Chr11:94962461f 4SNPAGAAGGGAGGAAAAAA AG A/G
rs27060304
MPD | dbSNP | MGI SNP Detail
Chr11:94962573f 4SNPCCCC  TC  CCCCCC CT C/T
rs29451776
MPD | dbSNP | MGI SNP Detail
Chr11:94962575f 3SNPA A   G   A      AG A/G
rs27060303
MPD | dbSNP | MGI SNP Detail
Chr11:94962785f 1SNPAG AAAAAAAAAAAAA    A/G
rs6410771
MPD | dbSNP | MGI SNP Detail
Chr11:94962863f 3SNP  T   C          TCCC/T
rs27060302
MPD | dbSNP | MGI SNP Detail
Chr11:94962951f 1SNPGG GGGGGGGGGAGGG    A/G
rs27060301
MPD | dbSNP | MGI SNP Detail
Chr11:94962970f 4SNPCA C  AC  CCCCCCCCA A/C
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs27060300
MPD | dbSNP | MGI SNP Detail
Chr11:94963418f 1SNPGA GGGGGGGGGGGGG    A/G
rs27060299
MPD | dbSNP | MGI SNP Detail
Chr11:94963480f 2SNPAC ACCCACCAAAAAA AC A/C
rs27060298
MPD | dbSNP | MGI SNP Detail
Chr11:94963521f 3SNPAA AGGGAGGAAAAAA AG A/G
rs223168045
MPD | dbSNP | MGI SNP Detail
Chr11:94963603f 1SNP                 CA A/C
rs244296352
MPD | dbSNP | MGI SNP Detail
Chr11:94963630f 1SNP                 GC C/G
rs48244061
MPD | dbSNP | MGI SNP Detail
Chr11:94963655f 2SNP      T         CCT C/T
rs233518150
MPD | dbSNP | MGI SNP Detail
Chr11:94963671f 1SNP                 GC C/G
rs51216834
MPD | dbSNP | MGI SNP Detail
Chr11:94963762f 1SNP      G         C   C/G
rs29395309
MPD | dbSNP | MGI SNP Detail
Chr11:94963764f 1SNP  T   A         T   A/T
rs27060297
MPD | dbSNP | MGI SNP Detail
Chr11:94963768f 1SNPT  T   T  TTCTTT    C/T
rs29442350
MPD | dbSNP | MGI SNP Detail
Chr11:94964284f 3SNPA     C         AAC A/C
rs29478740
MPD | dbSNP | MGI SNP Detail
Chr11:94964299f 3SNPA     G         AAG A/G
rs27060296
MPD | dbSNP | MGI SNP Detail
Chr11:94964419f 3SNPGA GAAAGAAGGGGGG GA A/G
rs27060295
MPD | dbSNP | MGI SNP Detail
Chr11:94964464f 3SNPC  C  TCG CCCCCC CT C/G/T
rs6184075
MPD | dbSNP | MGI SNP Detail
Chr11:94964540f 2SNPA A   T            TA/T
rs6184134
MPD | dbSNP | MGI SNP Detail
Chr11:94964570f 1SNP  G                TG/T
rs6185754
MPD | dbSNP | MGI SNP Detail
Chr11:94964853f 3SNP  A   G          AGGA/G
rs239768111
MPD | dbSNP | MGI SNP Detail
Chr11:94964858f 1SNP                 AG A/G
rs6185775
MPD | dbSNP | MGI SNP Detail
Chr11:94964863f 3SNP  A   G          AGGA/G
rs6185792
MPD | dbSNP | MGI SNP Detail
Chr11:94964874f 2SNP  T              TCCC/T
rs51799432
MPD | dbSNP | MGI SNP Detail
Chr11:94965147f 2SNP      T          GT G/T
rs27060294
MPD | dbSNP | MGI SNP Detail
Chr11:94965206f 3SNPCG C GGC  CCGCCC CG C/G
rs49614146
MPD | dbSNP | MGI SNP Detail
Chr11:94965214f 2SNP      G          AG A/G
rs27060293
MPD | dbSNP | MGI SNP Detail
Chr11:94965244f 1SNPGA GGGGG  GGGGGG    A/G
rs27060292
MPD | dbSNP | MGI SNP Detail
Chr11:94965305f 3SNPCT CTTTC  CCCCCC CT C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs27060291
MPD | dbSNP | MGI SNP Detail
Chr11:94965317f 1SNPCC C   C  CCTCCC    C/T
rs27060290
MPD | dbSNP | MGI SNP Detail
Chr11:94965330f 3SNPTT TCCCT   T  TT TC C/T
rs51088907
MPD | dbSNP | MGI SNP Detail
Chr11:94965498f 2SNPA     G          AG A/G
rs50263666
MPD | dbSNP | MGI SNP Detail
Chr11:94965504f 2SNPA     T         AAT A/T
rs48420605
MPD | dbSNP | MGI SNP Detail
Chr11:94965674f 2SNPT     C          TC C/T
rs46962102
MPD | dbSNP | MGI SNP Detail
Chr11:94965822f 2SNPA     G          AG A/G
rs47896007
MPD | dbSNP | MGI SNP Detail
Chr11:94965840f 2SNPC     T          CT C/T
rs50257206
MPD | dbSNP | MGI SNP Detail
Chr11:94965851f 2SNPA     G         AAG A/G
rs48506935
MPD | dbSNP | MGI SNP Detail
Chr11:94965897f 2SNPT     C          CC C/T
rs51206218
MPD | dbSNP | MGI SNP Detail
Chr11:94965903f 2SNPG     A          GA A/G
rs46050419
MPD | dbSNP | MGI SNP Detail
Chr11:94965965f 2SNPC     T          CT C/T
rs47358106
MPD | dbSNP | MGI SNP Detail
Chr11:94966003f 2SNPA     C          AC A/C
rs49307047
MPD | dbSNP | MGI SNP Detail
Chr11:94966056f 2SNPA     G          AG A/G
rs221896558
MPD | dbSNP | MGI SNP Detail
Chr11:94966061f 1SNP                 GA A/G
rs46155685
MPD | dbSNP | MGI SNP Detail
Chr11:94966066f 2SNPG     A          GA A/G
rs50824611
MPD | dbSNP | MGI SNP Detail
Chr11:94966296f 1SNP                 GC C/G
rs29438296
MPD | dbSNP | MGI SNP Detail
Chr11:94966934f 1SNPC C   A             A/C
rs29454750
MPD | dbSNP | MGI SNP Detail
Chr11:94966947f 1SNPC C   T             C/T
rs226217379
MPD | dbSNP | MGI SNP Detail
Chr11:94967079f 1SNP                 GA A/G
rs245490944
MPD | dbSNP | MGI SNP Detail
Chr11:94967110f 1SNP                 TC C/T
rs29453357
MPD | dbSNP | MGI SNP Detail
Chr11:94967288f 1SNPA A   C         A   A/C
rs27060289
MPD | dbSNP | MGI SNP Detail
Chr11:94967444f 4SNPAGAAGGGA  AAAAAAAAG A/G
rs27060288
MPD | dbSNP | MGI SNP Detail
Chr11:94967478f 1SNP     GGC   C C      C/G
rs29443282
MPD | dbSNP | MGI SNP Detail
Chr11:94967481f 3SNPG G   A         GGA A/G
rs29413170
MPD | dbSNP | MGI SNP Detail
Chr11:94967596f 2SNPG G   T         GGT G/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs13471324
MPD | dbSNP | MGI SNP Detail
Chr11:94967713f 2SNPC C   T         CCT C/T
rs29425819
MPD | dbSNP | MGI SNP Detail
Chr11:94967855f 3SNPG G   A         GGA A/G
rs27060287
MPD | dbSNP | MGI SNP Detail
Chr11:94967922f 4SNPGGGGAAAG  GGGGGGGGA A/G
rs27060286
MPD | dbSNP | MGI SNP Detail
Chr11:94968119f 1SNPGG GGGGG  GGAGGG    A/G
rs27060285
MPD | dbSNP | MGI SNP Detail
Chr11:94968209f 1SNPGG GGGGG  GGAGGG    A/G
rs266126645
MPD | dbSNP | MGI SNP Detail
Chr11:94968246f 1SNP                 GA A/G
rs233070176
MPD | dbSNP | MGI SNP Detail
Chr11:94968261f 1SNP                 CA A/C
rs29435421
MPD | dbSNP | MGI SNP Detail
Chr11:94968604f 2SNPC     T         CCT C/T
rs29465694
MPD | dbSNP | MGI SNP Detail
Chr11:94968614f 2SNPA     G         AAG A/G
rs29432081
MPD | dbSNP | MGI SNP Detail
Chr11:94968618f 3SNPC     T         CCT C/T
rs245163770
MPD | dbSNP | MGI SNP Detail
Chr11:94968782f 1SNP                 AG A/G
rs216118522
MPD | dbSNP | MGI SNP Detail
Chr11:94968802f 1SNP                 GA A/G
rs27060284
MPD | dbSNP | MGI SNP Detail
Chr11:94968930f 3SNPCC C TTC  CCCCCC CT C/T
rs49018706
MPD | dbSNP | MGI SNP Detail
Chr11:94969032f 1SNPG     T         G   G/T
rs260919796
MPD | dbSNP | MGI SNP Detail
Chr11:94969035f 1SNP                 GC C/G
rs27060283
MPD | dbSNP | MGI SNP Detail
Chr11:94969458f 2SNPTT TCCCT  TTTTTT TC C/T
rs27060282
MPD | dbSNP | MGI SNP Detail
Chr11:94969683f 2SNPCC C TTC  CCCCCC CT C/T
rs248530887
MPD | dbSNP | MGI SNP Detail
Chr11:94969770f 1SNP                 CT C/T
rs27060281
MPD | dbSNP | MGI SNP Detail
Chr11:94969930f 1SNPGA GGGGG  GGAGGG    A/G
rs220274398
MPD | dbSNP | MGI SNP Detail
Chr11:94970157f 1SNP                 CT C/T
rs237899034
MPD | dbSNP | MGI SNP Detail
Chr11:94970214f 1SNP                 TC C/T
rs255128700
MPD | dbSNP | MGI SNP Detail
Chr11:94970222f 1SNP                 CT C/T
rs224784807
MPD | dbSNP | MGI SNP Detail
Chr11:94970230f 1SNP                 GA A/G
rs247558978
MPD | dbSNP | MGI SNP Detail
Chr11:94970289f 1SNP                 AC A/C
rs27060280
MPD | dbSNP | MGI SNP Detail
Chr11:94970311f 2SNPAA A  GA  AAAAAA AG A/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs52505620
MPD | dbSNP | MGI SNP Detail
Chr11:94970456f 1SNPT     A             A/T
rs52178877
MPD | dbSNP | MGI SNP Detail
Chr11:94970460f 1SNPT     A             A/T
rs51949172
MPD | dbSNP | MGI SNP Detail
Chr11:94970622f 2SNPC     T          CT C/T
rs27060279
MPD | dbSNP | MGI SNP Detail
Chr11:94970662f 3SNPTC TCCCT  TTTTTT TC C/T
rs27060278
MPD | dbSNP | MGI SNP Detail
Chr11:94970719f 3SNPGG G AAG  GGGGGG GA A/G
rs27060277
MPD | dbSNP | MGI SNP Detail
Chr11:94970818f 3SNPTT T CCT  TTTTTTTTC C/T
rs27060276
MPD | dbSNP | MGI SNP Detail
Chr11:94970852f 3SNPGG GAAAG  GGGGGGGGA A/G
rs48287837
MPD | dbSNP | MGI SNP Detail
Chr11:94970895f 2SNPG     C          GC C/G
rs47506404
MPD | dbSNP | MGI SNP Detail
Chr11:94970983f 2SNP      A         CCA A/C
rs49654650
MPD | dbSNP | MGI SNP Detail
Chr11:94970997f 2SNPC     A         CCA A/C
rs50410606
MPD | dbSNP | MGI SNP Detail
Chr11:94971000f 2SNPG     A         GGA A/G
rs27060275
MPD | dbSNP | MGI SNP Detail
Chr11:94971090f 3SNPAG A GGA  AAAAAAAAG A/G
rs50786228
MPD | dbSNP | MGI SNP Detail
Chr11:94971114f 2SNP      C         AAC A/C
rs48654560
MPD | dbSNP | MGI SNP Detail
Chr11:94971116f 2SNP      T         GGT G/T
rs27060274
MPD | dbSNP | MGI SNP Detail
Chr11:94971148f 3SNPA  AGGGA  AAAAAAAAG A/G
rs29444743
MPD | dbSNP | MGI SNP Detail
Chr11:94971225f 3SNPC C   T         CCT C/T
rs29406855
MPD | dbSNP | MGI SNP Detail
Chr11:94971429f 3SNPC C   T         CCT C/T
rs27060273
MPD | dbSNP | MGI SNP Detail
Chr11:94971575f 4SNPGGGG  AG  GGGGGGGGA A/G
rs29448044
MPD | dbSNP | MGI SNP Detail
Chr11:94971611f 3SNPG G   A         GGA A/G
rs27060272
MPD | dbSNP | MGI SNP Detail
Chr11:94972138f 4SNPCCCCTTTC  CCCCCC CT C/T
rs27060271
MPD | dbSNP | MGI SNP Detail
Chr11:94972217f 1SNPGA GGGGG  GGGGGG    A/G
rs27060270
MPD | dbSNP | MGI SNP Detail
Chr11:94972337f 1SNPGA GGGGG  GGGGGG    A/G
rs29465941
MPD | dbSNP | MGI SNP Detail
Chr11:94972560f 3SNPA A   G          AG A/G
rs27060269
MPD | dbSNP | MGI SNP Detail
Chr11:94972921f 4SNPCCCCTTTC  CCCCCC CT C/T
rs27060268
MPD | dbSNP | MGI SNP Detail
Chr11:94973033f 4SNPAA AGGGA  AAGAAA AG A/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29481261
MPD | dbSNP | MGI SNP Detail
Chr11:94973283f 3SNPG G   C          GC C/G
rs27060267
MPD | dbSNP | MGI SNP Detail
Chr11:94973408f 2SNPGG  GGGG  GAGAG  AG A/G
rs52293499
MPD | dbSNP | MGI SNP Detail
Chr11:94973526f 2SNPC     T          CT C/T
rs27060266
MPD | dbSNP | MGI SNP Detail
Chr11:94973535f 2SNPGG G AA     AGG     A/G
rs52525438
MPD | dbSNP | MGI SNP Detail
Chr11:94973555f 2SNPG     C          GC C/G
rs47806866
MPD | dbSNP | MGI SNP Detail
Chr11:94973659f 2SNPC     T          CT C/T
rs108259746
MPD | dbSNP | MGI SNP Detail
Chr11:94973793f 2SNPT     C          TC C/T
rs47693973
MPD | dbSNP | MGI SNP Detail
Chr11:94973837f 1SNP      G             G
rs108223877
MPD | dbSNP | MGI SNP Detail
Chr11:94973858f 2SNP      T          CT C/T
rs47498957
MPD | dbSNP | MGI SNP Detail
Chr11:94973871f 2SNP      G          AG A/G
rs50720549
MPD | dbSNP | MGI SNP Detail
Chr11:94973996f 2SNP      T          CT C/T
rs48774098
MPD | dbSNP | MGI SNP Detail
Chr11:94974035f 2SNPC     G          CG C/G
rs49733472
MPD | dbSNP | MGI SNP Detail
Chr11:94974061f 2SNPA     G          AG A/G
rs27060265
MPD | dbSNP | MGI SNP Detail
Chr11:94974253f 1SNPTC TTTTT  TTTTTT    C/T
rs27060264
MPD | dbSNP | MGI SNP Detail
Chr11:94974317f 3SNPA  AGGGA  AAGAAA AG A/G
rs27060263
MPD | dbSNP | MGI SNP Detail
Chr11:94974323f 1SNPCT C   C  CC CCC    C/T
rs46701164
MPD | dbSNP | MGI SNP Detail
Chr11:94974357f 2SNPT     C          TC C/T
rs49780849
MPD | dbSNP | MGI SNP Detail
Chr11:94974415f 2SNPC     T         CCT C/T
rs49212673
MPD | dbSNP | MGI SNP Detail
Chr11:94974538f 2SNPC     T         CCT C/T
rs47586605
MPD | dbSNP | MGI SNP Detail
Chr11:94975275f 2SNPC     T         CCT C/T
rs27060262
MPD | dbSNP | MGI SNP Detail
Chr11:94975301f 1SNPTT T TTT  TTCTTT    C/T
rs27060261
MPD | dbSNP | MGI SNP Detail
Chr11:94975337f 4SNPT  TC CT  TTCTTTTTC C/T
rs27060260
MPD | dbSNP | MGI SNP Detail
Chr11:94975641f 4SNPAAAAGGGA  AAAAA AAG A/G
rs27060259
MPD | dbSNP | MGI SNP Detail
Chr11:94975716f 3SNPT  TCCCT   T TT TTC C/T
rs27060258
MPD | dbSNP | MGI SNP Detail
Chr11:94975974f 4SNPCCCC TTC  CCCCCCCCT C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs27060257
MPD | dbSNP | MGI SNP Detail
Chr11:94978118f 1SNPC  CCCCCCTCCCCCC    C/T
rs251151841
MPD | dbSNP | MGI SNP Detail
Chr11:94978271f 1SNP                 TC C/T
rs27060256
MPD | dbSNP | MGI SNP Detail
Chr11:94978279f 3SNPA  AGGGAGGAAGAAAAAG A/G

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory