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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Phyh phytanoyl-CoA hydroxylase MGI:891978 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs27063461 MPD | dbSNP | MGI SNP Detail | Chr2:4839931 | f | Phyh : Locus-Region | 1 | SNP | G | G | G | C | G | G | G | G | G | G | C | G | G | G | C | C/G | |
| rs27063460 MPD | dbSNP | MGI SNP Detail | Chr2:4840080 | f | Phyh : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | |
| rs27063459 MPD | dbSNP | MGI SNP Detail | Chr2:4840084 | f | Phyh : mRNA-UTR | 1 | SNP | G | G | G | C | G | G | G | G | G | G | G | G | G | G | C | C/G | |
| rs27063458 MPD | dbSNP | MGI SNP Detail | Chr2:4840121 | f | Phyh : Coding-NonSynonymous | 1 | SNP | T | T | T | A | T | T | T | T | T | T | A | T | T | T | A | A/T | |
| rs27063457 MPD | dbSNP | MGI SNP Detail | Chr2:4840399 | f | Phyh : Intron | 1 | SNP | C | C | C | G | C | C | C | C | C | C | C | C | G | C/G | |||
| rs27063456 MPD | dbSNP | MGI SNP Detail | Chr2:4840473 | f | Phyh : Intron | 1 | SNP | C | C | C | A | C | C | C | C | C | C | C | A | A | A/C | |||
| rs27063455 MPD | dbSNP | MGI SNP Detail | Chr2:4840497 | f | Phyh : Intron | 1 | SNP | T | T | T | C | T | T | T | T | T | C | T | T | T | C | C/T | ||
| rs27063454 MPD | dbSNP | MGI SNP Detail | Chr2:4840528 | f | Phyh : Intron | 1 | SNP | C | C | C | T | C | C | C | C | C | T | C | C | C | T | C/T | ||
| rs27063453 MPD | dbSNP | MGI SNP Detail | Chr2:4841242 | f | Phyh : Intron | 1 | SNP | G | G | G | C | G | G | G | G | G | C | G | G | G | C | C/G | ||
| rs27063452 MPD | dbSNP | MGI SNP Detail | Chr2:4841308 | f | Phyh : Intron | 1 | SNP | G | G | G | A | G | G | G | G | G | A | G | G | A | A | A/G | ||
| rs27063451 MPD | dbSNP | MGI SNP Detail | Chr2:4841366 | f | Phyh : Intron | 1 | SNP | G | G | G | A | G | G | G | G | G | A | G | G | A | A | A/G | ||
| rs27063450 MPD | dbSNP | MGI SNP Detail | Chr2:4841444 | f | Phyh : Intron | 1 | SNP | T | T | T | C | T | T | T | T | T | C | T | T | T | C | C/T | ||
| rs27063449 MPD | dbSNP | MGI SNP Detail | Chr2:4841473 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs27063448 MPD | dbSNP | MGI SNP Detail | Chr2:4841548 | f | Phyh : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | ||
| rs27063447 MPD | dbSNP | MGI SNP Detail | Chr2:4842047 | f | Phyh : Intron | 1 | SNP | C | C | C | T | C | C | C | C | C | C | C | C | C | T | C/T | ||
| rs33251268 MPD | dbSNP | MGI SNP Detail | Chr2:4843470 | f | Phyh : Intron | 1 | SNP | A | G | A | A | A/G | ||||||||||||
| rs33254846 MPD | dbSNP | MGI SNP Detail | Chr2:4843491 | f | Phyh : Intron | 1 | SNP | G | C | G | C | C/G | ||||||||||||
| rs27063446 MPD | dbSNP | MGI SNP Detail | Chr2:4843596 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G | ||
| rs27063445 MPD | dbSNP | MGI SNP Detail | Chr2:4843838 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||
| rs27063444 MPD | dbSNP | MGI SNP Detail | Chr2:4844478 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | ||
| rs27063443 MPD | dbSNP | MGI SNP Detail | Chr2:4844510 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G/T | ||
| rs27063442 MPD | dbSNP | MGI SNP Detail | Chr2:4845718 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | A | T | A/T | |||
| rs27063441 MPD | dbSNP | MGI SNP Detail | Chr2:4845842 | f | Phyh : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | C | A | A/C | |||
| rs27063440 MPD | dbSNP | MGI SNP Detail | Chr2:4846489 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | C | C | T | T | T | C | C | T | T | C/T | ||
| rs27063439 MPD | dbSNP | MGI SNP Detail | Chr2:4846864 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27063438 MPD | dbSNP | MGI SNP Detail | Chr2:4847042 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | ||
| rs27063437 MPD | dbSNP | MGI SNP Detail | Chr2:4847157 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | ||
| rs27063436 MPD | dbSNP | MGI SNP Detail | Chr2:4847575 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | ||
| rs27063435 MPD | dbSNP | MGI SNP Detail | Chr2:4848310 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs27063434 MPD | dbSNP | MGI SNP Detail | Chr2:4848561 | f | Phyh : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||
| rs27063433 MPD | dbSNP | MGI SNP Detail | Chr2:4848690 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||
| rs27063432 MPD | dbSNP | MGI SNP Detail | Chr2:4849022 | f | Phyh : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A/T | |
| rs27063431 MPD | dbSNP | MGI SNP Detail | Chr2:4849713 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |
| rs27063430 MPD | dbSNP | MGI SNP Detail | Chr2:4849743 | f | Phyh : Coding-Synonymous | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | G/T | |
| rs27063429 MPD | dbSNP | MGI SNP Detail | Chr2:4850076 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | G | C | C | C | C | C | C | C | G | C | C/G | |
| rs27063428 MPD | dbSNP | MGI SNP Detail | Chr2:4850202 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |
| rs27063427 MPD | dbSNP | MGI SNP Detail | Chr2:4850945 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |
| rs27063426 MPD | dbSNP | MGI SNP Detail | Chr2:4851138 | f | Phyh : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | |
| rs27063425 MPD | dbSNP | MGI SNP Detail | Chr2:4851422 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | C/T | |
| rs27063424 MPD | dbSNP | MGI SNP Detail | Chr2:4851457 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |
| rs27063423 MPD | dbSNP | MGI SNP Detail | Chr2:4851506 | f | Phyh : Intron | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A/C | ||
| rs27063422 MPD | dbSNP | MGI SNP Detail | Chr2:4851508 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |
| rs27063421 MPD | dbSNP | MGI SNP Detail | Chr2:4852896 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G | G | G | T | G | G/T | |
| rs27063420 MPD | dbSNP | MGI SNP Detail | Chr2:4853090 | f | Phyh : Intron | 1 | SNP | A | A | A | A | G | A | A | A | A | G | A | A/G | |||||
| rs27063419 MPD | dbSNP | MGI SNP Detail | Chr2:4853489 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||
| rs27063418 MPD | dbSNP | MGI SNP Detail | Chr2:4854172 | f | Phyh : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A/G | |
| rs27063417 MPD | dbSNP | MGI SNP Detail | Chr2:4854183 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | A | G | A/G | |
| rs27063416 MPD | dbSNP | MGI SNP Detail | Chr2:4854389 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |
| rs27063415 MPD | dbSNP | MGI SNP Detail | Chr2:4855344 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |
| rs27063414 MPD | dbSNP | MGI SNP Detail | Chr2:4855362 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G | |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27063413 MPD | dbSNP | MGI SNP Detail | Chr2:4855444 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | C/T | |
| rs27063412 MPD | dbSNP | MGI SNP Detail | Chr2:4855532 | f | Phyh : Intron | 1 | SNP | A | A | A | G | A | G | A | A | A | A | A | A | A | G | A | A/G | |
| rs27063411 MPD | dbSNP | MGI SNP Detail | Chr2:4855839 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | A/T | |
| rs27063410 MPD | dbSNP | MGI SNP Detail | Chr2:4855867 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G/T | |
| rs27063409 MPD | dbSNP | MGI SNP Detail | Chr2:4856043 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | C | T | C/T | ||
| rs27063408 MPD | dbSNP | MGI SNP Detail | Chr2:4856084 | f | Phyh : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A/G | |
| rs27063407 MPD | dbSNP | MGI SNP Detail | Chr2:4856283 | f | Phyh : Intron | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | A | A | C | A | A/C | |
| rs27063406 MPD | dbSNP | MGI SNP Detail | Chr2:4856309 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | G/T | |
| rs27063405 MPD | dbSNP | MGI SNP Detail | Chr2:4856326 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | A/T | |
| rs27063404 MPD | dbSNP | MGI SNP Detail | Chr2:4856934 | f | Phyh : Intron | 1 | SNP | G | G | G | A | G | A | G | G | G | G | G | G | G | A | G | A/G | |
| rs27063403 MPD | dbSNP | MGI SNP Detail | Chr2:4857101 | f | Phyh : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | C/T | |
| rs27063402 MPD | dbSNP | MGI SNP Detail | Chr2:4857122 | f | Phyh : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C/T | |
| rs27063401 MPD | dbSNP | MGI SNP Detail | Chr2:4857252 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |
| rs27063400 MPD | dbSNP | MGI SNP Detail | Chr2:4857365 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C/T | |
| rs27063399 MPD | dbSNP | MGI SNP Detail | Chr2:4857531 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | A | G | A/G | |
| rs27063398 MPD | dbSNP | MGI SNP Detail | Chr2:4857568 | f | Phyh : Intron | 1 | SNP | A | A | A | G | A | G | A | A | A | A | A | A | A | G | A | A/G | |
| rs27063397 MPD | dbSNP | MGI SNP Detail | Chr2:4857636 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |
| rs27063396 MPD | dbSNP | MGI SNP Detail | Chr2:4857668 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |
| rs27063395 MPD | dbSNP | MGI SNP Detail | Chr2:4857680 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | C/T | |
| rs27063394 MPD | dbSNP | MGI SNP Detail | Chr2:4857752 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |
| rs27063393 MPD | dbSNP | MGI SNP Detail | Chr2:4857791 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |
| rs27063392 MPD | dbSNP | MGI SNP Detail | Chr2:4857926 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |
| rs27063391 MPD | dbSNP | MGI SNP Detail | Chr2:4857933 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |
| rs27063390 MPD | dbSNP | MGI SNP Detail | Chr2:4857999 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |
| rs27063389 MPD | dbSNP | MGI SNP Detail | Chr2:4858044 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27063388 MPD | dbSNP | MGI SNP Detail | Chr2:4858059 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |
| rs27063387 MPD | dbSNP | MGI SNP Detail | Chr2:4858106 | f | Phyh : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A/G | ||||||
| rs27063386 MPD | dbSNP | MGI SNP Detail | Chr2:4858610 | f | Phyh : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A/G | |
| rs27063385 MPD | dbSNP | MGI SNP Detail | Chr2:4858636 | f | Phyh : Intron | 1 | SNP | T | T | T | C | T | C | T | T | T | T | T | T | T | T | C/T | ||
| rs27063384 MPD | dbSNP | MGI SNP Detail | Chr2:4858643 | f | Phyh : Intron | 1 | SNP | A | A | A | T | A | A | A | A | A | A | A | A | T | A | A/T | ||
| rs27063383 MPD | dbSNP | MGI SNP Detail | Chr2:4858653 | f | Phyh : Intron | 1 | SNP | A | A | A | G | A | G | A | A | A | A | A | A | A | G | A | A/G | |
| rs27063382 MPD | dbSNP | MGI SNP Detail | Chr2:4858687 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |
| rs27063381 MPD | dbSNP | MGI SNP Detail | Chr2:4858707 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |
| rs27063380 MPD | dbSNP | MGI SNP Detail | Chr2:4858719 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |
| rs27063379 MPD | dbSNP | MGI SNP Detail | Chr2:4858772 | f | Phyh : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |
| rs27063378 MPD | dbSNP | MGI SNP Detail | Chr2:4858944 | f | Phyh : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |
| rs27063377 MPD | dbSNP | MGI SNP Detail | Chr2:4859005 | f | Phyh : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G | |
| rs27063376 MPD | dbSNP | MGI SNP Detail | Chr2:4859030 | f | Phyh : Intron | 1 | SNP | T | T | T | C | T | C | T | T | T | T | T | T | T | T | C/T | ||
| rs27063375 MPD | dbSNP | MGI SNP Detail | Chr2:4859149 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | A/T | |
| rs27063374 MPD | dbSNP | MGI SNP Detail | Chr2:4859325 | f | Phyh : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |
| rs27063373 MPD | dbSNP | MGI SNP Detail | Chr2:4859622 | f | Phyh : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | A/C | |
| rs27063372 MPD | dbSNP | MGI SNP Detail | Chr2:4860114 | f | Phyh : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | |
| rs27063371 MPD | dbSNP | MGI SNP Detail | Chr2:4860142 | f | Phyh : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | C/G | |
| rs27063370 MPD | dbSNP | MGI SNP Detail | Chr2:4860168 | f | Phyh : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |
| rs27063369 MPD | dbSNP | MGI SNP Detail | Chr2:4860197 | f | Phyh : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | A/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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