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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Cpt2 carnitine palmitoyltransferase 2 MGI:109176 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs6393941 MPD | dbSNP | MGI SNP Detail | Chr4:107574666 | f | Cpt2 : Locus-Region | 2 | SNP | T | T | T | T | T | T | T | A | T | T | T | T | T | T | T | A | T | A/T |
| rs28146842 MPD | dbSNP | MGI SNP Detail | Chr4:107574761 | f | Cpt2 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs28146841 MPD | dbSNP | MGI SNP Detail | Chr4:107574829 | f | Cpt2 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | T | C | C/T | ||||
| rs28146840 MPD | dbSNP | MGI SNP Detail | Chr4:107574875 | f | Cpt2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||
| rs28146839 MPD | dbSNP | MGI SNP Detail | Chr4:107574881 | f | Cpt2 : Locus-Region | 1 | SNP | T | T | T | T | T | G | T | T | G | T | T | T | T | T | T | G/T | ||
| rs28146838 MPD | dbSNP | MGI SNP Detail | Chr4:107575281 | f | Cpt2 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |||
| rs28146837 MPD | dbSNP | MGI SNP Detail | Chr4:107575322 | f | Cpt2 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |||
| rs28146836 MPD | dbSNP | MGI SNP Detail | Chr4:107575519 | f | Cpt2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||||
| rs28146835 MPD | dbSNP | MGI SNP Detail | Chr4:107576384 | f | Cpt2 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |||
| rs28146834 MPD | dbSNP | MGI SNP Detail | Chr4:107576410 | f | Cpt2 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | G | C | C/G | ||||||
| rs28146833 MPD | dbSNP | MGI SNP Detail | Chr4:107576469 | f | Cpt2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | |||
| rs28146832 MPD | dbSNP | MGI SNP Detail | Chr4:107576518 | f | Cpt2 : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | A | A | T | A | A/T | |||||
| rs28146831 MPD | dbSNP | MGI SNP Detail | Chr4:107576705 | f | Cpt2 : mRNA-UTR | 1 | SNP | A | A | A | A | A | C | A | A | C | A | A | A | A | A | A | A/C | ||
| rs28146830 MPD | dbSNP | MGI SNP Detail | Chr4:107576861 | f | Cpt2 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | T | G | G | G | G | T | G | G/T | |||
| rs28146829 MPD | dbSNP | MGI SNP Detail | Chr4:107577041 | f | Cpt2 : Coding-Synonymous | 1 | SNP | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | |||
| rs28146828 MPD | dbSNP | MGI SNP Detail | Chr4:107577062 | f | Cpt2 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | ||
| rs28146827 MPD | dbSNP | MGI SNP Detail | Chr4:107577080 | f | Cpt2 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | |||
| rs28146826 MPD | dbSNP | MGI SNP Detail | Chr4:107577137 | f | Cpt2 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | |||
| rs28146825 MPD | dbSNP | MGI SNP Detail | Chr4:107577988 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | |||
| rs28146824 MPD | dbSNP | MGI SNP Detail | Chr4:107578164 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | G | A | G | G | G | G | G | A | G | G | A/G | ||
| rs28146823 MPD | dbSNP | MGI SNP Detail | Chr4:107578958 | f | Cpt2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A/T | ||
| rs28146822 MPD | dbSNP | MGI SNP Detail | Chr4:107579331 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||
| rs28146821 MPD | dbSNP | MGI SNP Detail | Chr4:107579575 | f | Cpt2 : Coding-NonSynonymous | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs28146820 MPD | dbSNP | MGI SNP Detail | Chr4:107580136 | f | Cpt2 : Coding-Synonymous | 1 | SNP | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | |||
| rs13465226 MPD | dbSNP | MGI SNP Detail | Chr4:107580238 | r | Cpt2 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs28146819 MPD | dbSNP | MGI SNP Detail | Chr4:107581683 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | ||
| rs28146818 MPD | dbSNP | MGI SNP Detail | Chr4:107581873 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | ||
| rs28146817 MPD | dbSNP | MGI SNP Detail | Chr4:107582288 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | C/G | ||
| rs28146816 MPD | dbSNP | MGI SNP Detail | Chr4:107583063 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | ||
| rs28146815 MPD | dbSNP | MGI SNP Detail | Chr4:107584821 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||
| rs28146814 MPD | dbSNP | MGI SNP Detail | Chr4:107585087 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | A | G | A/G | |||
| rs28146813 MPD | dbSNP | MGI SNP Detail | Chr4:107585131 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | A/T | ||
| rs28146812 MPD | dbSNP | MGI SNP Detail | Chr4:107585376 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs28146811 MPD | dbSNP | MGI SNP Detail | Chr4:107585415 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | |||
| rs28146810 MPD | dbSNP | MGI SNP Detail | Chr4:107585876 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | ||
| rs28146809 MPD | dbSNP | MGI SNP Detail | Chr4:107586844 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | G/T | ||
| rs28146808 MPD | dbSNP | MGI SNP Detail | Chr4:107587047 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | ||
| rs28146807 MPD | dbSNP | MGI SNP Detail | Chr4:107587065 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs28146806 MPD | dbSNP | MGI SNP Detail | Chr4:107587207 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs28146805 MPD | dbSNP | MGI SNP Detail | Chr4:107587330 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | A/T | ||
| rs28146804 MPD | dbSNP | MGI SNP Detail | Chr4:107587380 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||
| rs6160871 MPD | dbSNP | MGI SNP Detail | Chr4:107588356 | f | Cpt2 : Intron | 2 | SNP | T | T | T | T | T | T | G | G | T | T | G | T | T | T | T | G | T | G/T |
| rs28146803 MPD | dbSNP | MGI SNP Detail | Chr4:107588510 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | A/T | ||
| rs6162579 MPD | dbSNP | MGI SNP Detail | Chr4:107588654 | f | Cpt2 : Intron | 1 | SNP | G | A | A/G | |||||||||||||||
| rs6163156 MPD | dbSNP | MGI SNP Detail | Chr4:107588815 | f | Cpt2 : Intron | 1 | SNP | C | T | C/T | |||||||||||||||
| rs28146802 MPD | dbSNP | MGI SNP Detail | Chr4:107589025 | f | Cpt2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | G | A | A/G | ||||
| rs28146801 MPD | dbSNP | MGI SNP Detail | Chr4:107589387 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G | ||
| rs28146800 MPD | dbSNP | MGI SNP Detail | Chr4:107589428 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||
| rs28146799 MPD | dbSNP | MGI SNP Detail | Chr4:107589470 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | G/T | ||
| rs32050937 MPD | dbSNP | MGI SNP Detail | Chr4:107589931 | f | Cpt2 : Intron | 1 | SNP | G | G | A | G | A/G | |||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs28146798 MPD | dbSNP | MGI SNP Detail | Chr4:107590008 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | A/C | ||
| rs28146797 MPD | dbSNP | MGI SNP Detail | Chr4:107590490 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | ||
| rs28146796 MPD | dbSNP | MGI SNP Detail | Chr4:107590750 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | ||
| rs28146795 MPD | dbSNP | MGI SNP Detail | Chr4:107590795 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | A/G | ||
| rs28146794 MPD | dbSNP | MGI SNP Detail | Chr4:107590822 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | ||
| rs28146793 MPD | dbSNP | MGI SNP Detail | Chr4:107591871 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | ||
| rs28146792 MPD | dbSNP | MGI SNP Detail | Chr4:107592400 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs28146791 MPD | dbSNP | MGI SNP Detail | Chr4:107592496 | f | Cpt2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | ||
| rs28146790 MPD | dbSNP | MGI SNP Detail | Chr4:107592757 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | T | C/T | ||
| rs28146789 MPD | dbSNP | MGI SNP Detail | Chr4:107593192 | f | Cpt2 : Intron | 1 | SNP | A | A | A | A | A | G | A/G | |||||||||||
| rs28146788 MPD | dbSNP | MGI SNP Detail | Chr4:107593246 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||
| rs28146787 MPD | dbSNP | MGI SNP Detail | Chr4:107593257 | f | Cpt2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A/G | ||||||||
| rs28146786 MPD | dbSNP | MGI SNP Detail | Chr4:107593448 | f | Cpt2 : Intron | 1 | SNP | A | A | A | G | A | G | A | A | A | G | A | A/G | ||||||
| rs28146785 MPD | dbSNP | MGI SNP Detail | Chr4:107593548 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | C | G | G | G | G | C | G | C/G | ||
| rs28146784 MPD | dbSNP | MGI SNP Detail | Chr4:107593627 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | C/T | |||||
| rs28146783 MPD | dbSNP | MGI SNP Detail | Chr4:107593876 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | C | T | C | C | C | C | C | C/T | |||||
| rs28146782 MPD | dbSNP | MGI SNP Detail | Chr4:107594012 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | C | T | C | T | T | T | C | C/T | ||||||
| rs28146781 MPD | dbSNP | MGI SNP Detail | Chr4:107594211 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | T | C | C/T | |||
| rs28146780 MPD | dbSNP | MGI SNP Detail | Chr4:107594576 | f | Cpt2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | T | A/T | |||
| rs28146779 MPD | dbSNP | MGI SNP Detail | Chr4:107594611 | f | Cpt2 : Intron | 1 | SNP | T | G | T | G | T | T | T | T | G/T | |||||||||
| rs28146778 MPD | dbSNP | MGI SNP Detail | Chr4:107594612 | f | Cpt2 : Intron | 1 | SNP | A | A | A | G | A | A | A | G | A/G | |||||||||
| rs28146777 MPD | dbSNP | MGI SNP Detail | Chr4:107594736 | f | Cpt2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | C/T | |||||
| rs28146776 MPD | dbSNP | MGI SNP Detail | Chr4:107594928 | f | Cpt2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A/G | ||||||
| rs28146775 MPD | dbSNP | MGI SNP Detail | Chr4:107594962 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs28146774 MPD | dbSNP | MGI SNP Detail | Chr4:107594964 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | A/G | |||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs28146773 MPD | dbSNP | MGI SNP Detail | Chr4:107595025 | f | Cpt2 : Intron | 1 | SNP | C | T | C | C | C | C | C | C | C/T | |||||||||
| rs28146772 MPD | dbSNP | MGI SNP Detail | Chr4:107595035 | f | Cpt2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | A/G | ||||||
| rs28146771 MPD | dbSNP | MGI SNP Detail | Chr4:107595139 | f | Cpt2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | T | A/T | |||||
| rs28146770 MPD | dbSNP | MGI SNP Detail | Chr4:107595216 | f | Cpt2 : Intron | 1 | SNP | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A/G | |||
| rs28146769 MPD | dbSNP | MGI SNP Detail | Chr4:107595629 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | T | C | T | C | C | C | C | T | C | C/T | |||
| rs28146768 MPD | dbSNP | MGI SNP Detail | Chr4:107595693 | f | Cpt2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | T | C/T | |||||||
| rs28128167 MPD | dbSNP | MGI SNP Detail | Chr4:107596161 | f | Cpt2 : Locus-Region | 1 | SNP | T | C | T | C | T | T | C | C/T | ||||||||||
| rs28128166 MPD | dbSNP | MGI SNP Detail | Chr4:107596515 | f | Cpt2 : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | A | G | A/G | |||||||
| rs28128165 MPD | dbSNP | MGI SNP Detail | Chr4:107596594 | f | Cpt2 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | A | A/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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