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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Pex2 peroxisomal biogenesis factor 2 MGI:107486 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs30014017 MPD | dbSNP | MGI SNP Detail | Chr3:5558569 | f | Pex2 : Locus-Region | 1 | SNP | C | C | T | C | C/T | ||||||||||||||
| rs31154141 MPD | dbSNP | MGI SNP Detail | Chr3:5558604 | f | Pex2 : Locus-Region | 1 | SNP | A | A | T | A/T | |||||||||||||||
| rs30327361 MPD | dbSNP | MGI SNP Detail | Chr3:5559116 | f | Pex2 : Locus-Region | 1 | SNP | A | C | A/C | ||||||||||||||||
| rs33275848 MPD | dbSNP | MGI SNP Detail | Chr3:5559278 | f | Pex2 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | |||
| rs33275851 MPD | dbSNP | MGI SNP Detail | Chr3:5559341 | f | Pex2 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs33276704 MPD | dbSNP | MGI SNP Detail | Chr3:5559429 | f | Pex2 : Locus-Region | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | |||
| rs33276707 MPD | dbSNP | MGI SNP Detail | Chr3:5559570 | f | Pex2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||
| rs33276709 MPD | dbSNP | MGI SNP Detail | Chr3:5559622 | f | Pex2 : Locus-Region | 1 | SNP | C | G | G | G | C | C | C | C | C | C | C | C | C | C | C/G | ||||
| rs33276712 MPD | dbSNP | MGI SNP Detail | Chr3:5559671 | f | Pex2 : Locus-Region | 1 | SNP | T | T | T | T | T | G | T | T | G | T | T | T | T | G | T | G/T | |||
| rs33277455 MPD | dbSNP | MGI SNP Detail | Chr3:5559689 | f | Pex2 : Locus-Region | 1 | SNP | A | C | C | C | C | A | A | A | A | A | A | A | A | A | A | A/C | |||
| rs33277458 MPD | dbSNP | MGI SNP Detail | Chr3:5559780 | f | Pex2 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | |||
| rs33277461 MPD | dbSNP | MGI SNP Detail | Chr3:5559976 | f | Pex2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | A | G | A/G | |||||
| rs33278204 MPD | dbSNP | MGI SNP Detail | Chr3:5560149 | f | Pex2 : Locus-Region | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | |||
| rs33278207 MPD | dbSNP | MGI SNP Detail | Chr3:5560222 | f | Pex2 : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||
| rs33278209 MPD | dbSNP | MGI SNP Detail | Chr3:5560313 | f | Pex2 : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||
| rs33278211 MPD | dbSNP | MGI SNP Detail | Chr3:5560507 | f | Pex2 : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | |||
| rs33278212 MPD | dbSNP | MGI SNP Detail | Chr3:5560555 | f | Pex2 : mRNA-UTR | 1 | SNP | A | A | A | A | A | T | A | A | T | A | A | A | T | A | A/T | ||||
| rs33279474 MPD | dbSNP | MGI SNP Detail | Chr3:5561032 | f | Pex2 : Coding-NonSynonymous | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs33279476 MPD | dbSNP | MGI SNP Detail | Chr3:5561100 | f | Pex2 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs33279478 MPD | dbSNP | MGI SNP Detail | Chr3:5561454 | f | Pex2 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||
| rs33279481 MPD | dbSNP | MGI SNP Detail | Chr3:5562125 | f | Pex2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | |||
| rs31722903 MPD | dbSNP | MGI SNP Detail | Chr3:5562240 | f | Pex2 : Intron | 2 | SNP | A | A | G | G | G | G | A | A | A | A | A | A | A | A | A | A | A/G | ||
| rs33280466 MPD | dbSNP | MGI SNP Detail | Chr3:5562254 | f | Pex2 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | T | A | T | A/T | |||
| rs33275924 MPD | dbSNP | MGI SNP Detail | Chr3:5563070 | f | Pex2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||
| rs33275926 MPD | dbSNP | MGI SNP Detail | Chr3:5563123 | f | Pex2 : Intron | 1 | SNP | A | A | A | A | A | A | A | T | A | A | A | A | T | A | A/T | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs33275929 MPD | dbSNP | MGI SNP Detail | Chr3:5563151 | f | Pex2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | |||
| rs33275932 MPD | dbSNP | MGI SNP Detail | Chr3:5563198 | f | Pex2 : mRNA-UTR | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | T | A | T | A/T | |||
| rs33276805 MPD | dbSNP | MGI SNP Detail | Chr3:5563417 | f | Pex2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | |||
| rs33276808 MPD | dbSNP | MGI SNP Detail | Chr3:5563537 | f | Pex2 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | A | C | C | C | C | A | C | A/C | |||
| rs30427963 MPD | dbSNP | MGI SNP Detail | Chr3:5563795 | f | Pex2 : Intron | 1 | SNP | A | G | G | A/G | |||||||||||||||
| rs30650289 MPD | dbSNP | MGI SNP Detail | Chr3:5564149 | f | Pex2 : Intron | 1 | SNP | T | T | C | T | T | C/T | |||||||||||||
| rs30854366 MPD | dbSNP | MGI SNP Detail | Chr3:5564278 | f | Pex2 : Intron | 1 | SNP | G | G | T | G | G | G/T | |||||||||||||
| rs30948395 MPD | dbSNP | MGI SNP Detail | Chr3:5564361 | f | Pex2 : Intron | 1 | SNP | A | A | G | A | A | A/G | |||||||||||||
| rs33276811 MPD | dbSNP | MGI SNP Detail | Chr3:5564851 | f | Pex2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs33277644 MPD | dbSNP | MGI SNP Detail | Chr3:5564854 | f | Pex2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | G | T | T | T | T | G | T | G/T | |||
| rs33277646 MPD | dbSNP | MGI SNP Detail | Chr3:5564949 | f | Pex2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs33277649 MPD | dbSNP | MGI SNP Detail | Chr3:5565042 | f | Pex2 : Intron | 1 | SNP | T | T | T | C | T | C | T | T | T | C | T | C/T | |||||||
| rs30503767 MPD | dbSNP | MGI SNP Detail | Chr3:5565102 | f | Pex2 : Intron | 2 | SNP | T | T | A | A | A | T | T | T | T | T | T | T | T | T | T | T | A/T | ||
| rs33277653 MPD | dbSNP | MGI SNP Detail | Chr3:5565169 | f | Pex2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G/T | |||
| rs33278695 MPD | dbSNP | MGI SNP Detail | Chr3:5565228 | f | Pex2 : Intron | 1 | SNP | A | A | A | A | A | T | A | A | T | A | A | A | A | T | A | A/T | |||
| rs33278698 MPD | dbSNP | MGI SNP Detail | Chr3:5565267 | f | Pex2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | |||
| rs30256328 MPD | dbSNP | MGI SNP Detail | Chr3:5565388 | f | Pex2 : Intron | 2 | SNP | A | A | G | G | G | G | A | A | A | A | A | A | A | A | A | A | A | A/G | |
| rs30308135 MPD | dbSNP | MGI SNP Detail | Chr3:5565514 | f | Pex2 : Intron | 2 | SNP | G | G | A | A | A | A | G | G | G | G | G | G | G | G | G | G | G | A/G | |
| rs33278703 MPD | dbSNP | MGI SNP Detail | Chr3:5565548 | f | Pex2 : Intron | 1 | SNP | A | C | C | C | C | C | A | A | C | A | A | A | A | C | A | A/C | |||
| rs33279786 MPD | dbSNP | MGI SNP Detail | Chr3:5565683 | f | Pex2 : Intron | 1 | SNP | T | A | A | A | A | A | T | T | A | T | T | T | T | A | T | A/T | |||
| rs33279789 MPD | dbSNP | MGI SNP Detail | Chr3:5565755 | f | Pex2 : Intron | 1 | SNP | G | C | C | C | C | C | G | G | C | G | G | G | G | C | G | C/G | |||
| rs33279791 MPD | dbSNP | MGI SNP Detail | Chr3:5565819 | f | Pex2 : Intron | 1 | SNP | T | C | C | C | C | C | T | T | C | T | T | T | T | C | T | C/T | |||
| rs33279793 MPD | dbSNP | MGI SNP Detail | Chr3:5565856 | f | Pex2 : Intron | 1 | SNP | T | G | G | G | G | G | T | T | G | T | T | T | T | G | T | G/T | |||
| rs33280775 MPD | dbSNP | MGI SNP Detail | Chr3:5565898 | f | Pex2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||
| rs33280778 MPD | dbSNP | MGI SNP Detail | Chr3:5566014 | f | Pex2 : Intron | 1 | SNP | T | G | G | G | G | T | T | T | T | T | T | T | T | T | G/T | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs33280780 MPD | dbSNP | MGI SNP Detail | Chr3:5566043 | f | Pex2 : Intron | 1 | SNP | C | G | G | C | C | C | C | C | C | C | C | C | C | C/G | |||||
| rs30022525 MPD | dbSNP | MGI SNP Detail | Chr3:5567258 | f | Pex2 : Intron | 1 | SNP | A | G | A | A/G | |||||||||||||||
| rs31738191 MPD | dbSNP | MGI SNP Detail | Chr3:5567307 | f | Pex2 : Intron | 1 | SNP | G | A | G | G | A/G | ||||||||||||||
| rs31722085 MPD | dbSNP | MGI SNP Detail | Chr3:5567446 | f | Pex2 : Intron | 1 | SNP | G | A | G | G | A/G | ||||||||||||||
| rs30211066 MPD | dbSNP | MGI SNP Detail | Chr3:5567526 | f | Pex2 : Intron | 1 | SNP | T | C | T | T | C/T | ||||||||||||||
| rs31335996 MPD | dbSNP | MGI SNP Detail | Chr3:5567586 | f | Pex2 : Intron | 1 | SNP | C | G | C | C | C/G | ||||||||||||||
| rs30165881 MPD | dbSNP | MGI SNP Detail | Chr3:5567915 | f | Pex2 : Intron | 2 | SNP | G | G | C | C | C | C | G | C | G | G | C | G | G | G | G | C | G | C/G | |
| rs33280783 MPD | dbSNP | MGI SNP Detail | Chr3:5567959 | f | Pex2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | |||
| rs33281846 MPD | dbSNP | MGI SNP Detail | Chr3:5567978 | f | Pex2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs33281849 MPD | dbSNP | MGI SNP Detail | Chr3:5568035 | f | Pex2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | A/T | |||
| rs33281851 MPD | dbSNP | MGI SNP Detail | Chr3:5568299 | f | Pex2 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | C | G | G | G | G | C | G | C/G | |||
| rs33281853 MPD | dbSNP | MGI SNP Detail | Chr3:5568386 | f | Pex2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | A | T | T | T | T | A | T | A/T | |||
| rs33282985 MPD | dbSNP | MGI SNP Detail | Chr3:5568391 | f | Pex2 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | C/G | |||
| rs33282988 MPD | dbSNP | MGI SNP Detail | Chr3:5568597 | f | Pex2 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | G | T | T | T | T | G | T | G/T | |||
| rs33282991 MPD | dbSNP | MGI SNP Detail | Chr3:5568768 | f | Pex2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||
| rs33283824 MPD | dbSNP | MGI SNP Detail | Chr3:5568793 | f | Pex2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | |||
| rs33277116 MPD | dbSNP | MGI SNP Detail | Chr3:5569665 | f | Pex2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | |||
| rs33277119 MPD | dbSNP | MGI SNP Detail | Chr3:5569764 | f | Pex2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs33277122 MPD | dbSNP | MGI SNP Detail | Chr3:5570432 | f | Pex2 : Intron | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A/C | |||
| rs30072921 MPD | dbSNP | MGI SNP Detail | Chr3:5570695 | f | Pex2 : Intron | 2 | SNP | C | C | T | T | T | T | C | T | C | C | C | C | C | C | C | C | C | C/T | |
| rs33277866 MPD | dbSNP | MGI SNP Detail | Chr3:5570814 | f | Pex2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | |||
| rs33277869 MPD | dbSNP | MGI SNP Detail | Chr3:5570875 | f | Pex2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||
| rs30985122 MPD | dbSNP | MGI SNP Detail | Chr3:5571096 | f | Gm6146 : Locus-Region Pex2 : Intron | 2 | SNP | C | C | A | A | A | A | C | C | C | C | C | C | C | C | C | C | C | A/C | |
| rs33278844 MPD | dbSNP | MGI SNP Detail | Chr3:5571747 | f | Gm6146 : Locus-Region Pex2 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | A/T | |||
| rs33278847 MPD | dbSNP | MGI SNP Detail | Chr3:5571940 | f | Gm6146 : Locus-Region Pex2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs33278850 MPD | dbSNP | MGI SNP Detail | Chr3:5572058 | f | Gm6146 : Locus-Region Pex2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |||
| rs33278853 MPD | dbSNP | MGI SNP Detail | Chr3:5572116 | f | Gm6146 : Locus-Region Pex2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs30810651 MPD | dbSNP | MGI SNP Detail | Chr3:5572364 | f | Gm6146 : Locus-Region Pex2 : Intron | 1 | SNP | G | A | A | A/G | |||||||||||||||
| rs6321573 MPD | dbSNP | MGI SNP Detail | Chr3:5572503 | f | Gm6146 : Locus-Region Pex2 : Intron | 3 | SNP | A | C | C | C | C | A | C | C | A | A | C | A | A | A | A | C | A | A/C | |
| rs33279488 MPD | dbSNP | MGI SNP Detail | Chr3:5572555 | f | Gm6146 : Locus-Region Pex2 : Intron | 1 | SNP | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C/G | |||
| rs33279491 MPD | dbSNP | MGI SNP Detail | Chr3:5572868 | f | Gm6146 : Locus-Region Pex2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||
| rs30204798 MPD | dbSNP | MGI SNP Detail | Chr3:5575793 | f | Gm6146 : Intron Pex2 : Intron | 1 | SNP | A | C | A | A | A/C | ||||||||||||||
| rs33861865 MPD | dbSNP | MGI SNP Detail | Chr3:5576145 | f | Gm6146 : Coding-NonSynonymous Pex2 : Locus-Region | 1 | SNP | T | C | T | T | C/T | ||||||||||||||
| rs30015309 MPD | dbSNP | MGI SNP Detail | Chr3:5576220 | f | Gm6146 : Coding-NonSynonymous Pex2 : Locus-Region | 1 | SNP | G | C | G | G | C/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 06/05/2013 MGI 5.13 |
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