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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Epcam
epithelial cell adhesion molecule
MGI:106653

39 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs33676101
MPD | dbSNP | MGI SNP Detail
Chr17:87637784fEpcam : Intron3SNP  C   T C   C  C    C/T
rs33431612
MPD | dbSNP | MGI SNP Detail
Chr17:87638290fEpcam : Intron3SNP  C     T   T  T    C/T
rs33562637
MPD | dbSNP | MGI SNP Detail
Chr17:87641003fEpcam : Intron3SNP GG   G A   A  A    A/G
rs29534466
MPD | dbSNP | MGI SNP Detail
Chr17:87641703fEpcam : Intron1SNPCTT   T T           C/T
rs33672887
MPD | dbSNP | MGI SNP Detail
Chr17:87643021fEpcam : Intron2SNPG A   A A           A/G
rs51064872
MPD | dbSNP | MGI SNP Detail
Chr17:87645798fEpcam : Intron1SNP CC     C       T   C/T
rs47209385
MPD | dbSNP | MGI SNP Detail
Chr17:87645858fEpcam : Intron1SNP GG     G       T   G/T
rs49923832
MPD | dbSNP | MGI SNP Detail
Chr17:87646051fEpcam : Intron1SNP GG     G       A   A/G
rs47272759
MPD | dbSNP | MGI SNP Detail
Chr17:87646096fEpcam : Intron1SNP AA     A       T   A/T
rs47994277
MPD | dbSNP | MGI SNP Detail
Chr17:87646152fEpcam : Coding-Synonymous1SNP CC     C       T   C/T
rs46238213
MPD | dbSNP | MGI SNP Detail
Chr17:87646469fEpcam : Intron1SNPC TTTT CTTCT TT  TTCC/T
rs47548759
MPD | dbSNP | MGI SNP Detail
Chr17:87646499fEpcam : Intron1SNPC CCCC GCCGC CC  CCGC/G
rs33056680
MPD | dbSNP | MGI SNP Detail
Chr17:87646503fEpcam : Intron3SNPA GGGGG AG AAAAA AG A/G
rs51392539
MPD | dbSNP | MGI SNP Detail
Chr17:87646551fEpcam : Intron1SNPA CCCC ACCAC CC  CCAA/C
rs49564423
MPD | dbSNP | MGI SNP Detail
Chr17:87646617fEpcam : Intron1SNPT CCCC TCC C CC  CCTC/T
rs46296913
MPD | dbSNP | MGI SNP Detail
Chr17:87646701fEpcam : Intron1SNPA GGGG GGGAG GG  GGAA/G
rs51802240
MPD | dbSNP | MGI SNP Detail
Chr17:87646740fEpcam : Intron1SNPA AAAA AAAGA AA  AAAA/G
rs49160267
MPD | dbSNP | MGI SNP Detail
Chr17:87647692fEpcam : Intron1SNPA AAAA CAAAA AA  AAAA/C
rs48484115
MPD | dbSNP | MGI SNP Detail
Chr17:87647901fEpcam : Intron1SNPT TTTT CTTCT TT  TTTC/T
rs52152374
MPD | dbSNP | MGI SNP Detail
Chr17:87648387fEpcam : Intron1SNPG GGGG CGG G GG  GGGC/G
rs51711822
MPD | dbSNP | MGI SNP Detail
Chr17:87649046fEpcam : Intron1SNPT TTTT TTTCT TT  TTTC/T
rs33453474
MPD | dbSNP | MGI SNP Detail
Chr17:87649120fEpcam : Intron3SNPGAAAAAAAAAAA AA  AAGA/G
rs51702882
MPD | dbSNP | MGI SNP Detail
Chr17:87649194fEpcam : Intron1SNPG GGGG AGGGG GG  GGGA/G
rs50510928
MPD | dbSNP | MGI SNP Detail
Chr17:87649208fEpcam : Intron1SNPG GGGG AGGAG GG  GGGA/G
rs49689094
MPD | dbSNP | MGI SNP Detail
Chr17:87649321fEpcam : Intron1SNPC CCCC ACCCC CC  CCCA/C
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs47851349
MPD | dbSNP | MGI SNP Detail
Chr17:87649348fEpcam : Intron1SNPG GGGG TGGTG GG  GGGG/T
rs46184822
MPD | dbSNP | MGI SNP Detail
Chr17:87649420fEpcam : Intron1SNPT TTTT CTT T TT  TTTC/T
rs45804413
MPD | dbSNP | MGI SNP Detail
Chr17:87649541fEpcam : Intron1SNPA AAAA GAAGA AA  AAAA/G
rs50157442
MPD | dbSNP | MGI SNP Detail
Chr17:87649943fEpcam : Intron1SNPA AAAA CAAAA AA  AAAA/C
rs47379107
MPD | dbSNP | MGI SNP Detail
Chr17:87649960fEpcam : Intron1SNPT TTTT CTTCT TT  TTTC/T
rs47122622
MPD | dbSNP | MGI SNP Detail
Chr17:87650420fEpcam : Intron1SNPT TTTT CTTCT TT  TTTC/T
rs49750361
MPD | dbSNP | MGI SNP Detail
Chr17:87650691fEpcam : mRNA-UTR1SNPG GGGG TGG G GG  GGGG/T
rs49268424
MPD | dbSNP | MGI SNP Detail
Chr17:87650767fEpcam : mRNA-UTR1SNPG GGGG AGGGG GG  GGGA/G
rs46800435
MPD | dbSNP | MGI SNP Detail
Chr17:87650941fEpcam : mRNA-UTR1SNPG GGGG AGG G GG  GGGA/G
rs51996042
MPD | dbSNP | MGI SNP Detail
Chr17:87651199fEpcam : Locus-Region1SNPT TTTT  TTCT TT  TTTC/T
rs49151387
MPD | dbSNP | MGI SNP Detail
Chr17:87651795fEpcam : 689 bp downstream of1SNPG GGGG GGGCG GG  GGGC/G
rs47448453
MPD | dbSNP | MGI SNP Detail
Chr17:87651893fEpcam : 787 bp downstream of1SNPA AAAA  AAGA AA  AAAA/G
rs48310177
MPD | dbSNP | MGI SNP Detail
Chr17:87651990fEpcam : 884 bp downstream of1SNPT CCCC TCCTC CC  CCTC/T
rs47774195
MPD | dbSNP | MGI SNP Detail
Chr17:87652055fEpcam : 949 bp downstream of1SNPG GGGG  GGGG GG  GGTG/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory