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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Lta
lymphotoxin A
MGI:104797

68 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs247637660
MPD | dbSNP | MGI SNP Detail
Chr17:35201195fLta : 1970 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
1SNP              C      G      C/G
rs45782783
MPD | dbSNP | MGI SNP Detail
Chr17:35201285fLta : 1880 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
1SNPC CCC C CCCCC      CC    TCCC/T
rs264090297
MPD | dbSNP | MGI SNP Detail
Chr17:35201298fLta : 1867 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
1SNP              T      C      C/T
rs33425824
MPD | dbSNP | MGI SNP Detail
Chr17:35201341fLta : 1824 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
3SNP TC    T C    C      C      C/T
rs8257036
MPD | dbSNP | MGI SNP Detail
Chr17:35201381fLta : 1784 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
3SNPG GTGGTGGGTTGTTTG GGGG  TTGTG/T
rs8257037
MPD | dbSNP | MGI SNP Detail
Chr17:35201499fLta : 1666 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
1SNP  GG GGGGG   G AG G   G G   A/G
rs49129685
MPD | dbSNP | MGI SNP Detail
Chr17:35201505fLta : 1660 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
1SNP   C  C C C C      CC     TCC/T
rs8257038
MPD | dbSNP | MGI SNP Detail
Chr17:35201512fLta : 1653 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
6SNPG AGAAGGGAGGGGGGG AGGAG GGGGA/G
rs8257039
MPD | dbSNP | MGI SNP Detail
Chr17:35201515fLta : 1650 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
2SNPC CCCCCCTCCCCC CC CCC C CCCCC/T
rs226528126
MPD | dbSNP | MGI SNP Detail
Chr17:35201516fLta : 1649 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
1SNP              C      G      C/G
rs244918278
MPD | dbSNP | MGI SNP Detail
Chr17:35201569fLta : 1596 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
1SNP              T      G      G/T
rs8237589
MPD | dbSNP | MGI SNP Detail
Chr17:35201612rLta : 1553 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
4SNPG GAGGAGGGAGGAAGGGGGGGA AAGGA/G
rs51114377
MPD | dbSNP | MGI SNP Detail
Chr17:35201627fLta : 1538 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
1SNPC CCC C CCC C      CC    CCTC/T
rs8237590
MPD | dbSNP | MGI SNP Detail
Chr17:35201639rLta : 1526 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Intron
4SNPA AAAAAAAAAAAGGAAAAAAAA GGAAA/G
rs8237591
MPD | dbSNP | MGI SNP Detail
Chr17:35201703rLta : 1462 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Coding-Synonymous
3SNP  GCGGCGGG   GAGGGG  GC G   A/C/G
rs217629611
MPD | dbSNP | MGI SNP Detail
Chr17:35201748fLta : 1417 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Coding-Synonymous
1SNP              C      T      C/T
rs8254220
MPD | dbSNP | MGI SNP Detail
Chr17:35201817rLta : 1348 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Coding-Synonymous
2SNPC CCCCCCACCCCC CCCCCC C CCCCA/C
rs8237592
MPD | dbSNP | MGI SNP Detail
Chr17:35201930rLta : 1235 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : mRNA-UTR
2SNP  GGGGGGGG   T GGGG   G T   G/T
rs8237593
MPD | dbSNP | MGI SNP Detail
Chr17:35201939rLta : 1226 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : mRNA-UTR
6SNPTTCCCCCTCCCCTCCCTCCTTCC CCCCC/T
rs8238042
MPD | dbSNP | MGI SNP Detail
Chr17:35201976rLta : 1189 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : mRNA-UTR
2SNPG GGGGGGGGGGGA GGGGGG G AAGGA/G
rs8238041
MPD | dbSNP | MGI SNP Detail
Chr17:35202027rLta : 1138 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
4SNPGGAAAAAGAAAAGAAAGAAGGAA AAAAA/G
rs8238040
MPD | dbSNP | MGI SNP Detail
Chr17:35202078rLta : 1087 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
4SNPA ACAACAAAACACCCAAAAAAC CCACA/C
rs237932177
MPD | dbSNP | MGI SNP Detail
Chr17:35202162fLta : 1003 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNP              T      C      C/T
rs252257481
MPD | dbSNP | MGI SNP Detail
Chr17:35202253fLta : 912 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNP              T      C      C/T
rs48161640
MPD | dbSNP | MGI SNP Detail
Chr17:35202352fLta : 813 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
2SNPT TC  C TTC T C    TTT   CTCC/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs248589141
MPD | dbSNP | MGI SNP Detail
Chr17:35202381fLta : 784 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNP              C      T      C/T
rs265971390
MPD | dbSNP | MGI SNP Detail
Chr17:35202455fLta : 710 bp downstream of
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNP              T      G      G/T
rs229011290
MPD | dbSNP | MGI SNP Detail
Chr17:35202771fLta : Intron
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNP              T      C      C/T
rs244167541
MPD | dbSNP | MGI SNP Detail
Chr17:35202880fLta : Intron
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNP              G      C      C/G
rs262806771
MPD | dbSNP | MGI SNP Detail
Chr17:35202904fLta : Intron
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNP              G      A      A/G
rs49993158
MPD | dbSNP | MGI SNP Detail
Chr17:35202983fLta : Intron
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNPC CTC T CCTTC      CC    TCTC/T
rs226562595
MPD | dbSNP | MGI SNP Detail
Chr17:35203008fLta : Intron
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNP              A      G      A/G
rs244999876
MPD | dbSNP | MGI SNP Detail
Chr17:35203069fLta : Intron
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNP              T      C      C/T
rs215854755
MPD | dbSNP | MGI SNP Detail
Chr17:35203330fLta : mRNA-UTR
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNP              A      G      A/G
rs227236806
MPD | dbSNP | MGI SNP Detail
Chr17:35203344fLta : mRNA-UTR
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNP              A      G      A/G
rs254588067
MPD | dbSNP | MGI SNP Detail
Chr17:35203562fLta : mRNA-UTR
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNP              T      G      G/T
rs51936572
MPD | dbSNP | MGI SNP Detail
Chr17:35203830fLta : Coding-Synonymous
nmf318 : within coordinates of
repro17 : within coordinates of
Tnf : Locus-Region
1SNPG GGG G GGGGG      GG    GGTG/T
rs217871671
MPD | dbSNP | MGI SNP Detail
Chr17:35204088fLta : Coding-Synonymous
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              C      T      C/T
rs235248499
MPD | dbSNP | MGI SNP Detail
Chr17:35204179fLta : Intron
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              A      T      A/T
rs8252728
MPD | dbSNP | MGI SNP Detail
Chr17:35204312fLta : Intron
nmf318 : within coordinates of
repro17 : within coordinates of
5SNPA GGGGGAGGGGAGG A GAAGG GGGGA/G
rs214108644
MPD | dbSNP | MGI SNP Detail
Chr17:35204430fLta : Coding-Synonymous
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              C      T      C/T
rs231101744
MPD | dbSNP | MGI SNP Detail
Chr17:35204642fLta : Coding-Synonymous
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              A      G      A/G
rs33064182
MPD | dbSNP | MGI SNP Detail
Chr17:35204716fLta : Intron
nmf318 : within coordinates of
repro17 : within coordinates of
4SNPC ACA CCCACCC C    CCA   CCCA/C
rs221049717
MPD | dbSNP | MGI SNP Detail
Chr17:35204870fD17Nds3 : within coordinates of
Lta : Intron
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              G      A      A/G
rs251797947
MPD | dbSNP | MGI SNP Detail
Chr17:35204985fD17Nds3 : within coordinates of
Lta : Intron
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              A      G      A/G
rs260476952
MPD | dbSNP | MGI SNP Detail
Chr17:35205109fLta : Intron
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              A      G      A/G
rs33069381
MPD | dbSNP | MGI SNP Detail
Chr17:35205468fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
3SNP GA    G A    A      A      A/G
rs45910435
MPD | dbSNP | MGI SNP Detail
Chr17:35205607fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNPC CTC T CCTCC      CC    CCCC/T
rs51980545
MPD | dbSNP | MGI SNP Detail
Chr17:35206064fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNPG GGG G GGGGG      GG    AGGA/G
rs47855470
MPD | dbSNP | MGI SNP Detail
Chr17:35206091fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
2SNPC TCT C TTCCC C    CCT   CTCC/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs258480936
MPD | dbSNP | MGI SNP Detail
Chr17:35206147fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              A      G      A/G
rs225862281
MPD | dbSNP | MGI SNP Detail
Chr17:35206265fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              G      T      G/T
rs241295821
MPD | dbSNP | MGI SNP Detail
Chr17:35206356fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              T      C      C/T
rs48424455
MPD | dbSNP | MGI SNP Detail
Chr17:35206399fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
2SNP GT      T    G      T G    G/T
rs231619488
MPD | dbSNP | MGI SNP Detail
Chr17:35206555fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              G      A      A/G
rs260064624
MPD | dbSNP | MGI SNP Detail
Chr17:35206574fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              C      T      C/T
rs263947085
MPD | dbSNP | MGI SNP Detail
Chr17:35206616fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              T      C      C/T
rs47973417
MPD | dbSNP | MGI SNP Detail
Chr17:35206619fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNPG GGG G GGGGG      GG    GGAA/G
rs229046781
MPD | dbSNP | MGI SNP Detail
Chr17:35206647fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              T      C      C/T
rs248972888
MPD | dbSNP | MGI SNP Detail
Chr17:35206747fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              G      A      A/G
rs51990326
MPD | dbSNP | MGI SNP Detail
Chr17:35206781fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP GG                    A    A/G
rs49035124
MPD | dbSNP | MGI SNP Detail
Chr17:35206807fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNPT TTT T TTTTT      TT    CTTC/T
rs47963667
MPD | dbSNP | MGI SNP Detail
Chr17:35206812fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
2SNPT TCT C TTC T C    TTT   TTTC/T
rs33298466
MPD | dbSNP | MGI SNP Detail
Chr17:35206868fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
4SNPAAGGG GAGGGGA G    AAG A AGAA/G
rs245684154
MPD | dbSNP | MGI SNP Detail
Chr17:35206958fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              T      C      C/T
rs215581730
MPD | dbSNP | MGI SNP Detail
Chr17:35207026fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              C      T      C/T
rs240692798
MPD | dbSNP | MGI SNP Detail
Chr17:35207217fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP              T      C      C/T
rs108585998
MPD | dbSNP | MGI SNP Detail
Chr17:35207264fLta : Locus-Region
nmf318 : within coordinates of
repro17 : within coordinates of
1SNP CT                         C/T

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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory