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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Lta lymphotoxin A MGI:104797 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs45782783 MPD | dbSNP | MGI SNP Detail | Chr17:35338230 | f | Lta : Locus-Region Tnf : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C/T | ||||||||||
| rs33425824 MPD | dbSNP | MGI SNP Detail | Chr17:35338261 | f | Lta : Locus-Region Tnf : Intron | 1 | SNP | T | C | T | C | C/T | |||||||||||||||||||||
| rs8257036 MPD | dbSNP | MGI SNP Detail | Chr17:35338326 | f | Lta : Locus-Region Tnf : Intron | 2 | SNP | G | G | T | G | G | T | G | G | G | T | T | G | T | T | G | G | G | G | T | T | G | T | G/T | |||
| rs8257037 MPD | dbSNP | MGI SNP Detail | Chr17:35338444 | f | Lta : Locus-Region Tnf : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A/G | ||||||||||||
| rs49129685 MPD | dbSNP | MGI SNP Detail | Chr17:35338450 | f | Lta : Locus-Region Tnf : Intron | 1 | SNP | C | C | C | C | C | C | C | T | C | C/T | ||||||||||||||||
| rs8257038 MPD | dbSNP | MGI SNP Detail | Chr17:35338457 | f | Lta : Locus-Region Tnf : Intron | 3 | SNP | G | A | G | A | A | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | G | G | G | A/G | ||
| rs8257039 MPD | dbSNP | MGI SNP Detail | Chr17:35338460 | f | Lta : Locus-Region Tnf : Intron | 2 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C/T | ||
| rs8237589 MPD | dbSNP | MGI SNP Detail | Chr17:35338557 | r | Lta : Locus-Region Tnf : Intron | 3 | SNP | G | G | A | G | G | A | G | G | G | A | G | G | A | G | G | G | G | G | G | A | A | A | G | G | A/G | |
| rs51114377 MPD | dbSNP | MGI SNP Detail | Chr17:35338572 | f | Lta : Locus-Region Tnf : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C/T | |||||||||||
| rs8237590 MPD | dbSNP | MGI SNP Detail | Chr17:35338584 | r | Lta : Locus-Region Tnf : Intron | 3 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | G | A | A | A/G | |
| rs8237591 MPD | dbSNP | MGI SNP Detail | Chr17:35338648 | r | Lta : Locus-Region Tnf : Coding-Synonymous | 2 | SNP | G | C | G | G | C | G | G | G | G | G | G | G | G | C | G | C/G | ||||||||||
| rs8254220 MPD | dbSNP | MGI SNP Detail | Chr17:35338762 | r | Lta : Locus-Region Tnf : Coding-Synonymous | 2 | SNP | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A/C | |
| rs8237592 MPD | dbSNP | MGI SNP Detail | Chr17:35338875 | r | Lta : Locus-Region Tnf : mRNA-UTR | 2 | SNP | G | G | G | G | G | G | G | G | T | G | G | G | G | G | T | G/T | ||||||||||
| rs8237593 MPD | dbSNP | MGI SNP Detail | Chr17:35338884 | r | Lta : Locus-Region Tnf : mRNA-UTR | 4 | SNP | T | T | C | C | C | C | C | T | C | C | C | C | T | C | C | T | C | C | T | T | C | C | C | C | C | C/T |
| rs8238042 MPD | dbSNP | MGI SNP Detail | Chr17:35338921 | r | Lta : Locus-Region Tnf : mRNA-UTR | 2 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | A | A | G | G | A/G | |
| rs8238041 MPD | dbSNP | MGI SNP Detail | Chr17:35338972 | r | Lta : Locus-Region Tnf : Locus-Region | 3 | SNP | G | G | A | A | A | A | A | G | A | A | A | A | G | A | A | G | A | A | G | G | A | A | A | A | A | A/G |
| rs8238040 MPD | dbSNP | MGI SNP Detail | Chr17:35339023 | r | Lta : Locus-Region Tnf : Locus-Region | 2 | SNP | A | A | C | A | A | C | A | A | A | A | C | A | C | C | A | A | A | A | A | C | C | C | A | C | A/C | |
| rs48161640 MPD | dbSNP | MGI SNP Detail | Chr17:35339297 | f | Lta : Locus-Region Tnf : Locus-Region | 1 | SNP | T | T | C | C | T | T | C | T | T | T | C | T | C | C/T | ||||||||||||
| rs49993158 MPD | dbSNP | MGI SNP Detail | Chr17:35339928 | f | Lta : Locus-Region | 1 | SNP | C | C | T | C | T | C | C | T | T | C | C | C | T | C | T | C/T | ||||||||||
| rs51936572 MPD | dbSNP | MGI SNP Detail | Chr17:35340775 | f | Lta : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G/T | ||||||||||
| rs8252728 MPD | dbSNP | MGI SNP Detail | Chr17:35341257 | f | Lta : Intron | 3 | SNP | A | G | G | G | G | G | A | G | G | G | G | A | G | A | G | A | A | G | G | G | G | G | A/G | |||
| rs33064182 MPD | dbSNP | MGI SNP Detail | Chr17:35341661 | f | Lta : Intron | 2 | SNP | C | A | C | A | C | C | C | A | C | C | C | C | C | C | C | C | A/C | |||||||||
| rs33069381 MPD | dbSNP | MGI SNP Detail | Chr17:35342413 | f | Lta : Locus-Region | 1 | SNP | G | A | G | A | A/G | |||||||||||||||||||||
| rs45910435 MPD | dbSNP | MGI SNP Detail | Chr17:35342552 | f | Lta : Locus-Region | 1 | SNP | C | C | T | C | T | C | C | T | C | C | C | C | C | C | C | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 06/05/2013 MGI 5.13 |
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