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Mouse SNPs
Query Results -- Summary
Genome Coordinate Discrepancy
The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details).
 Symbol
Name
ID
Dag1
dystroglycan 1
MGI:101864

118 matching SNPs displayed


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs51026296
MPD | dbSNP | MGI SNP Detail
Chr9:108106531fDag1 : Locus-Region1SNPT TTTT T TT TTTTCTC/T
rs50564174
MPD | dbSNP | MGI SNP Detail
Chr9:108106555fDag1 : Locus-Region1SNPC CCCC C CC CCCCT C/T
rs48484921
MPD | dbSNP | MGI SNP Detail
Chr9:108106800fDag1 : Locus-Region1SNPG GGGG A GGGGGGGGGA/G
rs50501612
MPD | dbSNP | MGI SNP Detail
Chr9:108106843fDag1 : Locus-Region1SNPC CCCC T CC CCCCT C/T
rs51155516
MPD | dbSNP | MGI SNP Detail
Chr9:108107125fDag1 : Locus-Region1SNPT TTTT T TTCTTTTCTC/T
rs13460769
MPD | dbSNP | MGI SNP Detail
Chr9:108107859rDag1 : Locus-Region1SNPT TTTT C TT TTTTCTC/T
rs47765215
MPD | dbSNP | MGI SNP Detail
Chr9:108108224fDag1 : Locus-Region1SNPT TTTT C TT TTTTCCC/T
rs50878599
MPD | dbSNP | MGI SNP Detail
Chr9:108108859fDag1 : mRNA-UTR1SNPG GGGG G GG GGGGT G/T
rs49642016
MPD | dbSNP | MGI SNP Detail
Chr9:108109772fDag1 : Coding-NonSynonymous1SNPT TTTT C TTCTTTTC C/T
rs45948245
MPD | dbSNP | MGI SNP Detail
Chr9:108110088fDag1 : Coding-Synonymous1SNPA AA   G AAGAAAAGGA/G
rs50437926
MPD | dbSNP | MGI SNP Detail
Chr9:108110517fDag1 : Coding-Synonymous1SNPA AAAA G AA AAAA  A/G
rs51143791
MPD | dbSNP | MGI SNP Detail
Chr9:108111162fDag1 : Coding-Synonymous1SNPC CCCC C CCTCCCCTCC/T
rs48787661
MPD | dbSNP | MGI SNP Detail
Chr9:108112095fDag1 : Intron1SNPA AAAA G AA AAAAA A/G
rs49989504
MPD | dbSNP | MGI SNP Detail
Chr9:108112965fDag1 : Intron1SNPT TTTT C TTCTTTTCTC/T
rs49599881
MPD | dbSNP | MGI SNP Detail
Chr9:108112990fDag1 : Intron1SNPG GGGG G GGAGGGGA A/G
rs48832795
MPD | dbSNP | MGI SNP Detail
Chr9:108113173fDag1 : Intron1SNPT TTTT C TT TTTT CC/T
rs49281998
MPD | dbSNP | MGI SNP Detail
Chr9:108114052fDag1 : Intron1SNPG GGGG C GG GGGGG C/G
rs50152008
MPD | dbSNP | MGI SNP Detail
Chr9:108114384fDag1 : Intron1SNPC CCCC C CC CCCCTCC/T
rs49990470
MPD | dbSNP | MGI SNP Detail
Chr9:108114412fDag1 : Intron1SNPA AAAA A AA AAAAGAA/G
rs46684566
MPD | dbSNP | MGI SNP Detail
Chr9:108114546fDag1 : Intron1SNPA AAAA A AA AAAAT A/T
rs51467477
MPD | dbSNP | MGI SNP Detail
Chr9:108114641fDag1 : Intron1SNPT TTTT C TTCTTTTC C/T
rs47574230
MPD | dbSNP | MGI SNP Detail
Chr9:108114828fDag1 : Intron1SNPA AAAA C AACAAAACAA/C
rs50671772
MPD | dbSNP | MGI SNP Detail
Chr9:108114880fDag1 : Intron1SNPC CCCC T CC CCCCT C/T
rs50660911
MPD | dbSNP | MGI SNP Detail
Chr9:108115799fDag1 : Intron1SNPA AAAA G AAGAAAAGAA/G
rs48769388
MPD | dbSNP | MGI SNP Detail
Chr9:108116066fDag1 : Intron1SNPA AAAA G AAGAAAAGAA/G
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs46087611
MPD | dbSNP | MGI SNP Detail
Chr9:108116401fDag1 : Intron1SNPC CCCC T CC CCCCCCC/T
rs50788138
MPD | dbSNP | MGI SNP Detail
Chr9:108116405fDag1 : Intron1SNPA AAAA A AA AAAATAA/T
rs46330062
MPD | dbSNP | MGI SNP Detail
Chr9:108116455fDag1 : Intron1SNPT TTTT T TTCTTTT TC/T
rs50322665
MPD | dbSNP | MGI SNP Detail
Chr9:108116659fDag1 : Intron1SNPT TTT    TTCTT TCTC/T
rs48475275
MPD | dbSNP | MGI SNP Detail
Chr9:108116707fDag1 : Intron1SNPT TTTT C TTC TTTT C/T
rs48183022
MPD | dbSNP | MGI SNP Detail
Chr9:108117664fDag1 : Intron1SNPG GGGG   GG GGGG AA/G
rs50374393
MPD | dbSNP | MGI SNP Detail
Chr9:108118508fDag1 : Intron1SNPG GGGG A GGAGGGGAGA/G
rs49047621
MPD | dbSNP | MGI SNP Detail
Chr9:108118952fDag1 : Intron1SNPG GGGG A GGAGGGGAGA/G
rs46977820
MPD | dbSNP | MGI SNP Detail
Chr9:108119029fDag1 : Intron1SNPT TTTT G TTGTTTTGTG/T
rs46498780
MPD | dbSNP | MGI SNP Detail
Chr9:108119155fDag1 : Intron1SNPG GGGG G GGGGGGGCGC/G
rs47330249
MPD | dbSNP | MGI SNP Detail
Chr9:108119341fDag1 : Intron1SNPG GGGG A GG GGGG GA/G
rs50047712
MPD | dbSNP | MGI SNP Detail
Chr9:108119396fDag1 : Intron1SNPC CCCC T CC CCCCTCC/T
rs48328939
MPD | dbSNP | MGI SNP Detail
Chr9:108119747fDag1 : Intron1SNPT TTTT A TT TTTTTTA/T
rs51682370
MPD | dbSNP | MGI SNP Detail
Chr9:108120215fDag1 : Intron1SNPG GGGG A GG GGGGAGA/G
rs51133102
MPD | dbSNP | MGI SNP Detail
Chr9:108120699fDag1 : mRNA-UTR1SNPC CCCC C CCCCCCCCTC/T
rs47966608
MPD | dbSNP | MGI SNP Detail
Chr9:108120877fDag1 : Intron1SNPG GGGG G GGGGGGGAGA/G
rs48300367
MPD | dbSNP | MGI SNP Detail
Chr9:108122581fDag1 : Intron1SNPC CCCC G CCGCCCCCCC/G
rs46873462
MPD | dbSNP | MGI SNP Detail
Chr9:108122797fDag1 : Intron1SNPA AAAA T AATAAAAAAA/T
rs46647115
MPD | dbSNP | MGI SNP Detail
Chr9:108123398fDag1 : Intron1SNPT TTTT C TTCTTTTCCC/T
rs50069911
MPD | dbSNP | MGI SNP Detail
Chr9:108123598fDag1 : Intron1SNPG GGGG G GGGGGGGGAA/G
rs45976113
MPD | dbSNP | MGI SNP Detail
Chr9:108123632fDag1 : Intron1SNPC CCCC C CC CCCCTCC/T
rs51926548
MPD | dbSNP | MGI SNP Detail
Chr9:108123885fDag1 : Intron1SNPC GGGG C CGCGGCGCCC/G
rs47922758
MPD | dbSNP | MGI SNP Detail
Chr9:108123948fDag1 : Intron1SNPA AAAA G AAGAAAAGAA/G
rs47863373
MPD | dbSNP | MGI SNP Detail
Chr9:108124400fDag1 : Intron1SNPG GGGG A GGAGGGGGGA/G
rs47770121
MPD | dbSNP | MGI SNP Detail
Chr9:108124448fDag1 : Intron1SNPT TTTT T TTTTTTTTCC/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs30381397
MPD | dbSNP | MGI SNP Detail
Chr9:108124828fDag1 : Intron2SNPGGCCCCGG GCGCCGCGGC/G
rs45666874
MPD | dbSNP | MGI SNP Detail
Chr9:108124936fDag1 : Intron1SNPT TTTT C TTCTTTTCCC/T
rs45944125
MPD | dbSNP | MGI SNP Detail
Chr9:108125280fDag1 : Intron1SNPT TTTT A TTATTTTATA/T
rs48923028
MPD | dbSNP | MGI SNP Detail
Chr9:108125391fDag1 : Intron1SNPT TTTT A TTATTTTATA/T
rs49039155
MPD | dbSNP | MGI SNP Detail
Chr9:108125425fDag1 : Intron1SNPA AAAA G AAGAAAAAAA/G
rs51112241
MPD | dbSNP | MGI SNP Detail
Chr9:108125492fDag1 : Intron1SNPG GGGG A GGAGGGGAGA/G
rs46736749
MPD | dbSNP | MGI SNP Detail
Chr9:108125747fDag1 : Intron1SNPA AAAA A AAGAAAAGAA/G
rs47198011
MPD | dbSNP | MGI SNP Detail
Chr9:108125938fDag1 : Intron1SNPG GGGG T GGTGGGGGGG/T
rs52113597
MPD | dbSNP | MGI SNP Detail
Chr9:108125974fDag1 : Intron1SNPC CCCC A CCACCCCAAA/C
rs51988135
MPD | dbSNP | MGI SNP Detail
Chr9:108126299fDag1 : Intron1SNPT TTTT T TTTTTTTCTC/T
rs49606315
MPD | dbSNP | MGI SNP Detail
Chr9:108126996fDag1 : Intron1SNPG GGGG G GGGGGGGAGA/G
rs51461317
MPD | dbSNP | MGI SNP Detail
Chr9:108127749fDag1 : Intron1SNPC CCCC A CCACCCCCCA/C
rs47557456
MPD | dbSNP | MGI SNP Detail
Chr9:108128033fDag1 : Intron1SNP  GGGG C GG GGGG CC/G
rs49918416
MPD | dbSNP | MGI SNP Detail
Chr9:108128251fDag1 : Intron1SNPG GGGG A GGAGGGGG A/G
rs48087913
MPD | dbSNP | MGI SNP Detail
Chr9:108128296fDag1 : Intron1SNPG GGGG T GGT GGGTTG/T
rs30430791
MPD | dbSNP | MGI SNP Detail
Chr9:108128533fDag1 : Intron1SNP AA   G  A        A/G
rs29749918
MPD | dbSNP | MGI SNP Detail
Chr9:108129472fDag1 : Intron1SNPTTC   C           C/T
rs49751431
MPD | dbSNP | MGI SNP Detail
Chr9:108130291fDag1 : Intron1SNPG GGGG G GG GGGGCGC/G
rs51305265
MPD | dbSNP | MGI SNP Detail
Chr9:108130321fDag1 : Intron1SNPC CCCC G CC CCCCGGC/G
rs49698937
MPD | dbSNP | MGI SNP Detail
Chr9:108130413fDag1 : Intron1SNPC CCCC T CCTCCCCTTC/T
rs49300920
MPD | dbSNP | MGI SNP Detail
Chr9:108131027fDag1 : Intron1SNPC CCCC   CC CCCC TC/T
rs6298447
MPD | dbSNP | MGI SNP Detail
Chr9:108131632fDag1 : Intron1SNP      C T         C/T
rs6298935
MPD | dbSNP | MGI SNP Detail
Chr9:108131687fDag1 : Intron1SNP      G T         G/T
rs6312935
MPD | dbSNP | MGI SNP Detail
Chr9:108131995fDag1 : Intron1SNP      A G         A/G
rs51002155
MPD | dbSNP | MGI SNP Detail
Chr9:108132556fDag1 : Intron1SNPT TTTT C TTCTTTTCCC/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs46237620
MPD | dbSNP | MGI SNP Detail
Chr9:108132811fDag1 : Intron1SNPT TTTT C TTCTTTTCTC/T
rs33764720
MPD | dbSNP | MGI SNP Detail
Chr9:108133313fDag1 : Intron1SNPA     A  T        A/T
rs51396566
MPD | dbSNP | MGI SNP Detail
Chr9:108133710fDag1 : Intron1SNPT TTTT C TTCTTTTTTC/T
rs46947043
MPD | dbSNP | MGI SNP Detail
Chr9:108134984fDag1 : Intron1SNPT TTTT T TTTTTTTGTG/T
rs49789552
MPD | dbSNP | MGI SNP Detail
Chr9:108135633fDag1 : Intron1SNP  CCCC C CC CCC GCC/G
rs47725706
MPD | dbSNP | MGI SNP Detail
Chr9:108135755fDag1 : Intron1SNPG GGGG C GGCGGGGGGC/G
rs49711315
MPD | dbSNP | MGI SNP Detail
Chr9:108137924fDag1 : Intron1SNP  AAA  G AA AAAAAAA/G
rs45803556
MPD | dbSNP | MGI SNP Detail
Chr9:108138399fDag1 : Intron1SNPG GGGG A GGAGGGGAGA/G
rs52102931
MPD | dbSNP | MGI SNP Detail
Chr9:108139226fDag1 : Intron1SNP   C   T  CTCCCC  C/T
rs33731535
MPD | dbSNP | MGI SNP Detail
Chr9:108139567fDag1 : Intron1SNP      C  T        C/T
rs50836857
MPD | dbSNP | MGI SNP Detail
Chr9:108141582fDag1 : Intron1SNP   A   G   G      A/G
rs50131786
MPD | dbSNP | MGI SNP Detail
Chr9:108142235fDag1 : Intron1SNP       T  GTG  G  G/T
rs49595173
MPD | dbSNP | MGI SNP Detail
Chr9:108142446fDag1 : Intron1SNPC  CCC T  CTCCCC  C/T
rs47985767
MPD | dbSNP | MGI SNP Detail
Chr9:108145822fDag1 : Intron1SNPC  G   G   G   C  C/G
rs49983396
MPD | dbSNP | MGI SNP Detail
Chr9:108147242fDag1 : Intron1SNPC CCCC C CCTCCCCTCC/T
rs46208527
MPD | dbSNP | MGI SNP Detail
Chr9:108147412fDag1 : Intron1SNPA AAAA   AA AAAAGAA/G
rs47829345
MPD | dbSNP | MGI SNP Detail
Chr9:108147686fDag1 : Intron1SNPA AAAA   AAGAAAAAAA/G
rs47359116
MPD | dbSNP | MGI SNP Detail
Chr9:108147830fDag1 : Intron1SNPT TTTT T TTTTTTTATA/T
rs51064450
MPD | dbSNP | MGI SNP Detail
Chr9:108149161fDag1 : Intron1SNPC CCCC   CCCCCCCTCC/T
rs46535559
MPD | dbSNP | MGI SNP Detail
Chr9:108149350fDag1 : Intron1SNPT TTTT C TTCTTTTCTC/T
rs50939992
MPD | dbSNP | MGI SNP Detail
Chr9:108149494fDag1 : Intron1SNPA AAAA T AATAAAATAA/T
rs47502068
MPD | dbSNP | MGI SNP Detail
Chr9:108149852fDag1 : Intron1SNPG GGGG C GGCGGGGCGC/G
rs29975494
MPD | dbSNP | MGI SNP Detail
Chr9:108150119fDag1 : Intron2SNPTTAAAATT TATAATATTA/T
rs50004658
MPD | dbSNP | MGI SNP Detail
Chr9:108150391fDag1 : Intron1SNPA AAAA G AAGAAAAGAA/G
rs49998710
MPD | dbSNP | MGI SNP Detail
Chr9:108150812fDag1 : Intron1SNPC CCCC C CCCCCCCACA/C
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs47836072
MPD | dbSNP | MGI SNP Detail
Chr9:108151388fDag1 : Intron1SNPG GGGG A GGAGGGGAGA/G
rs48920399
MPD | dbSNP | MGI SNP Detail
Chr9:108151840fDag1 : Intron1SNPG GGGG C GGCGGGGGGC/G
rs45921833
MPD | dbSNP | MGI SNP Detail
Chr9:108151980fDag1 : Intron1SNPT TTTT   T CTTTTCTC/T
rs50515875
MPD | dbSNP | MGI SNP Detail
Chr9:108152186fDag1 : Intron1SNPC CCCC   CCTCCCCTCC/T
rs51278589
MPD | dbSNP | MGI SNP Detail
Chr9:108152970fDag1 : Intron1SNPT TTTT C TTCTTTTCTC/T
rs51238296
MPD | dbSNP | MGI SNP Detail
Chr9:108153407fDag1 : Intron1SNPG GGGG   GGAGGGGAGA/G
rs46059882
MPD | dbSNP | MGI SNP Detail
Chr9:108153571fDag1 : Intron1SNPG GGGG A GGAGGGGAGA/G
rs47728385
MPD | dbSNP | MGI SNP Detail
Chr9:108155908fDag1 : Intron1SNPC CCCC T CCTCCCCTCC/T
rs49152567
MPD | dbSNP | MGI SNP Detail
Chr9:108157521fDag1 : Intron1SNPC CCCC C CCCCCCCTCC/T
rs33633678
MPD | dbSNP | MGI SNP Detail
Chr9:108157861fDag1 : Intron1SNPT C   C  C        C/T
rs6196024
MPD | dbSNP | MGI SNP Detail
Chr9:108158517fDag1 : Intron1SNP      G A         A/G
rs6196027
MPD | dbSNP | MGI SNP Detail
Chr9:108158519fDag1 : Intron1SNP      G A         A/G
rs6209428
MPD | dbSNP | MGI SNP Detail
Chr9:108158631fDag1 : Intron1SNP      C A         A/C
rs6210566
MPD | dbSNP | MGI SNP Detail
Chr9:108158879fDag1 : Intron1SNP      G A         A/G
rs6211165
MPD | dbSNP | MGI SNP Detail
Chr9:108159010fDag1 : Intron1SNP      C A         A/C
rs50445734
MPD | dbSNP | MGI SNP Detail
Chr9:108160060fDag1 : Intron1SNPT TTT  T TTTTTTTCTC/T
rs49560112
MPD | dbSNP | MGI SNP Detail
Chr9:108160145fDag1 : Intron1SNPG GGGG C GG GGGGGGC/G
rs33749175
MPD | dbSNP | MGI SNP Detail
Chr9:108163177fDag1 : Intron1SNP AG   G  G        A/G

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last database update
05/08/2013
MGI 5.13
The Jackson Laboratory