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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Usf1 upstream transcription factor 1 MGI:99542 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs13465196 MPD | dbSNP | MGI SNP Detail | Chr1:173340211 | f | Arhgap30 : mRNA-UTR Usf1 : Locus-Region | 1 | SNP | G | G | T | T | G/T | |||||||||||||
| rs31539484 MPD | dbSNP | MGI SNP Detail | Chr1:173340282 | f | Arhgap30 : mRNA-UTR Usf1 : Locus-Region | 1 | SNP | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C/T | |||
| rs31538553 MPD | dbSNP | MGI SNP Detail | Chr1:173340325 | f | Arhgap30 : mRNA-UTR Usf1 : Locus-Region | 2 | SNP | G | A | G | G | G | A | G | G | A | A/G | ||||||||
| rs31538552 MPD | dbSNP | MGI SNP Detail | Chr1:173340567 | f | Arhgap30 : Locus-Region Usf1 : Locus-Region | 2 | SNP | T | T | A | A | T | T | A | A | A | A | A | T | T | A | A | A/T | ||
| rs30553775 MPD | dbSNP | MGI SNP Detail | Chr1:173340981 | f | Usf1 : Locus-Region | 2 | SNP | A | A | A | A | A | A | C | A | A | C | A | C | A | A | A | A | A/C | |
| rs32595832 MPD | dbSNP | MGI SNP Detail | Chr1:173340986 | f | Usf1 : Locus-Region | 1 | SNP | C | C | A | C | A | A/C | ||||||||||||
| rs31538551 MPD | dbSNP | MGI SNP Detail | Chr1:173341185 | f | Usf1 : Locus-Region | 2 | SNP | T | T | T | T | T | C | T | T | C | T | C | T | T | T | C/T | |||
| rs32038561 MPD | dbSNP | MGI SNP Detail | Chr1:173341189 | f | Usf1 : Locus-Region | 1 | SNP | T | C | C | C | C/T | |||||||||||||
| rs31538550 MPD | dbSNP | MGI SNP Detail | Chr1:173341235 | f | Usf1 : Locus-Region | 2 | SNP | A | A | A | A | A | A | G | A | A | G | A | G | A | A | A | A | A/G | |
| rs31538549 MPD | dbSNP | MGI SNP Detail | Chr1:173341279 | f | Usf1 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | A | G | G | G | A/G | ||||||
| rs31538548 MPD | dbSNP | MGI SNP Detail | Chr1:173341300 | f | Usf1 : Locus-Region | 1 | SNP | T | C | C | T | C | C | C | C | C | T | T | C | C | C/T | ||||
| rs31538547 MPD | dbSNP | MGI SNP Detail | Chr1:173341401 | f | Usf1 : Locus-Region | 2 | SNP | C | C | C | C | C | C | C | T | C | T | C | C | C/T | |||||
| rs31538546 MPD | dbSNP | MGI SNP Detail | Chr1:173341510 | f | Usf1 : Locus-Region | 1 | SNP | C | A | A | C | C | A | A | A | A | A | C | C | A | A | A/C | |||
| rs31498508 MPD | dbSNP | MGI SNP Detail | Chr1:173341612 | f | Usf1 : Locus-Region | 2 | SNP | C | C | A | A | C | A | A | A | A | A | A | A | A | A/C | ||||
| rs31538545 MPD | dbSNP | MGI SNP Detail | Chr1:173341794 | f | Usf1 : Locus-Region | 1 | SNP | G | G | G | G | T | G | T | G | T | G | G | G | G/T | |||||
| rs31864623 MPD | dbSNP | MGI SNP Detail | Chr1:173341823 | f | Usf1 : mRNA-UTR | 1 | SNP | C | C | T | T | C/T | |||||||||||||
| rs30465544 MPD | dbSNP | MGI SNP Detail | Chr1:173341921 | f | Usf1 : mRNA-UTR | 2 | SNP | C | T | T | C | C | C | T | C | C | C | C | T | T | C/T | ||||
| rs31439167 MPD | dbSNP | MGI SNP Detail | Chr1:173341975 | f | Usf1 : mRNA-UTR | 2 | SNP | C | T | T | C | C | C | T | C | T | C | C | C | T | T | C/T | |||
| rs31538544 MPD | dbSNP | MGI SNP Detail | Chr1:173342105 | f | Usf1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | A/G | |||
| rs31321207 MPD | dbSNP | MGI SNP Detail | Chr1:173342163 | f | Usf1 : Intron | 2 | SNP | G | G | G | G | G | A | G | G | G | A | G | A | G | G | G | G | A/G | |
| rs31544709 MPD | dbSNP | MGI SNP Detail | Chr1:173342334 | f | Usf1 : Intron | 2 | SNP | C | C | C | C | C | G | C | C | C | G | C | G | C | C | C | C/G | ||
| rs31544708 MPD | dbSNP | MGI SNP Detail | Chr1:173342485 | f | Usf1 : Intron | 2 | SNP | A | A | A | A | A | G | G | A | A | G | A | G | A | A | A | A | A/G | |
| rs31544707 MPD | dbSNP | MGI SNP Detail | Chr1:173342520 | f | Usf1 : Intron | 1 | SNP | A | C | C | A | A | C | C | C | C | C | C | A | A | C | C | A/C | ||
| rs31544706 MPD | dbSNP | MGI SNP Detail | Chr1:173342866 | f | Usf1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | G | A | A | A | A | A/G | ||
| rs31544705 MPD | dbSNP | MGI SNP Detail | Chr1:173343055 | f | Usf1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs31544704 MPD | dbSNP | MGI SNP Detail | Chr1:173343247 | f | Usf1 : Intron | 1 | SNP | G | A | A | G | G | G | A | A | G | A | G | G | G | A | A | A/G | ||
| rs31543973 MPD | dbSNP | MGI SNP Detail | Chr1:173343725 | f | Usf1 : Intron | 1 | SNP | G | A | A | G | G | G | A | A | G | A | G | G | G | A | A | A/G | ||
| rs31543972 MPD | dbSNP | MGI SNP Detail | Chr1:173343982 | f | Usf1 : Intron | 1 | SNP | C | G | G | C | C | G | G | G | G | G | G | C | C | G | G | C/G | ||
| rs31543971 MPD | dbSNP | MGI SNP Detail | Chr1:173343985 | f | Usf1 : Intron | 1 | SNP | G | T | T | G | G | T | T | T | G | T | G | G | G | T | T | G/T | ||
| rs31543970 MPD | dbSNP | MGI SNP Detail | Chr1:173344042 | f | Usf1 : Intron | 1 | SNP | C | T | T | C | C | T | T | T | C | T | C | C | C | T | T | C/T | ||
| rs31543969 MPD | dbSNP | MGI SNP Detail | Chr1:173344060 | f | Usf1 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | A/C | ||
| rs31543968 MPD | dbSNP | MGI SNP Detail | Chr1:173344094 | f | Usf1 : Intron | 1 | SNP | C | T | T | C | C | T | T | T | T | T | T | C | C | T | T | C/T | ||
| rs31543967 MPD | dbSNP | MGI SNP Detail | Chr1:173344105 | f | Usf1 : Intron | 1 | SNP | G | A | A | G | G | A | A | A | A | A | A | G | G | A | A | A/G | ||
| rs31543966 MPD | dbSNP | MGI SNP Detail | Chr1:173344184 | f | Usf1 : Intron | 1 | SNP | T | C | C | T | T | T | C | C | T | C | T | T | T | C | C | C/T | ||
| rs31543965 MPD | dbSNP | MGI SNP Detail | Chr1:173344358 | f | Usf1 : Intron | 1 | SNP | G | A | A | G | G | G | A | A | A | A | A | G | G | A | A | A/G | ||
| rs31543964 MPD | dbSNP | MGI SNP Detail | Chr1:173344387 | f | Usf1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs31543163 MPD | dbSNP | MGI SNP Detail | Chr1:173344524 | f | Usf1 : Intron | 2 | SNP | G | A | A | G | G | G | G | A | A | G | G | G | G | A | A/G | |||
| rs31543162 MPD | dbSNP | MGI SNP Detail | Chr1:173344625 | f | Usf1 : mRNA-UTR | 1 | SNP | T | C | C | T | T | T | C | C | C | C | C | T | T | C | C | C/T | ||
| rs31543161 MPD | dbSNP | MGI SNP Detail | Chr1:173345284 | f | Usf1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | T | C | C | C | C | C/T | ||
| rs31543160 MPD | dbSNP | MGI SNP Detail | Chr1:173345586 | f | Usf1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | T | C | C | C | C | C/T | ||
| rs31543159 MPD | dbSNP | MGI SNP Detail | Chr1:173345779 | f | Usf1 : Intron | 1 | SNP | A | G | G | A | A | A | G | G | G | G | G | A | A | G | G | A/G | ||
| rs31543158 MPD | dbSNP | MGI SNP Detail | Chr1:173345803 | f | Usf1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | G | A | A | A | A | A/G | ||
| rs31543157 MPD | dbSNP | MGI SNP Detail | Chr1:173346179 | f | Usf1 : Intron | 1 | SNP | C | T | T | C | C | T | C | T | C | C | T | T | C/T | |||||
| rs31543156 MPD | dbSNP | MGI SNP Detail | Chr1:173346180 | f | Usf1 : Intron | 1 | SNP | C | G | C | C | C | G | G | G | G | C | C | G | C/G | |||||
| rs31543155 MPD | dbSNP | MGI SNP Detail | Chr1:173346189 | f | Usf1 : Intron | 1 | SNP | A | T | T | A | A | A | T | T | A | T | A | A | A | T | A/T | |||
| rs31543154 MPD | dbSNP | MGI SNP Detail | Chr1:173346772 | f | Usf1 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | A/T | ||
| rs31542373 MPD | dbSNP | MGI SNP Detail | Chr1:173346811 | f | Usf1 : Intron | 1 | SNP | G | A | G | G | G | G | A | G | G | G | G | G | G | A | G | A/G | ||
| rs31542372 MPD | dbSNP | MGI SNP Detail | Chr1:173346970 | f | Usf1 : Coding-NonSynonymous | 1 | SNP | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C/G | ||
| rs31542371 MPD | dbSNP | MGI SNP Detail | Chr1:173346984 | f | Usf1 : Coding-NonSynonymous | 1 | SNP | C | C | T | C | C | C | C | T | C | C | C | C | C | C | C | C/T | ||
| rs31542370 MPD | dbSNP | MGI SNP Detail | Chr1:173347054 | f | Usf1 : Coding-Synonymous | 1 | SNP | C | C | C | T | C | C | T | C | T | C | C | C | C/T | |||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs31542369 MPD | dbSNP | MGI SNP Detail | Chr1:173347156 | f | Usf1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | A | G | G | G | G | A/G | ||
| rs31542368 MPD | dbSNP | MGI SNP Detail | Chr1:173347243 | f | Tstd1 : Locus-Region Usf1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | C/T | ||
| rs31542367 MPD | dbSNP | MGI SNP Detail | Chr1:173347261 | f | Tstd1 : Locus-Region Usf1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | G | A | A | A | A | A/G | ||
| rs31542366 MPD | dbSNP | MGI SNP Detail | Chr1:173347299 | f | Tstd1 : Locus-Region Usf1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs31542365 MPD | dbSNP | MGI SNP Detail | Chr1:173347310 | f | Tstd1 : Locus-Region Usf1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs31542364 MPD | dbSNP | MGI SNP Detail | Chr1:173347346 | f | Tstd1 : Locus-Region Usf1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | C | G | C | G | G | G | G | C/G | ||
| rs31541673 MPD | dbSNP | MGI SNP Detail | Chr1:173347494 | f | Tstd1 : Locus-Region Usf1 : Intron | 1 | SNP | T | T | T | T | T | T | C | T | C | T | T | T | T | C/T | ||||
| rs31541672 MPD | dbSNP | MGI SNP Detail | Chr1:173347513 | f | Tstd1 : Locus-Region Usf1 : Intron | 1 | SNP | A | A | A | A | A | A | C | C | A | A/C | ||||||||
| rs31541671 MPD | dbSNP | MGI SNP Detail | Chr1:173347548 | f | Tstd1 : Locus-Region Usf1 : Intron | 1 | SNP | G | T | G | G | G | G | T | G | G | G | G | G | G | T | G | G/T | ||
| rs31541670 MPD | dbSNP | MGI SNP Detail | Chr1:173347628 | f | Tstd1 : Locus-Region Usf1 : Coding-Synonymous | 1 | SNP | A | A | A | A | A | A | A | A | T | A | T | A | A | A | A | A/T | ||
| rs31541669 MPD | dbSNP | MGI SNP Detail | Chr1:173347743 | f | Tstd1 : Locus-Region Usf1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | G | A | A | A | A | A/G | |||
| rs31541668 MPD | dbSNP | MGI SNP Detail | Chr1:173347751 | f | Tstd1 : Locus-Region Usf1 : Intron | 1 | SNP | C | G | C | C | C | C | C | C | C/G | |||||||||
| rs31541667 MPD | dbSNP | MGI SNP Detail | Chr1:173347757 | f | Tstd1 : Locus-Region Usf1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | T | C | C | C | C | C/T | |||
| rs31541666 MPD | dbSNP | MGI SNP Detail | Chr1:173347848 | f | Tstd1 : Locus-Region Usf1 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs31093636 MPD | dbSNP | MGI SNP Detail | Chr1:173348186 | f | Tstd1 : Locus-Region Usf1 : Coding-Synonymous | 2 | SNP | T | T | C | C | T | T | C | C | C | C | C | C | C | T | T | C | C | C/T |
| rs31541665 MPD | dbSNP | MGI SNP Detail | Chr1:173348228 | f | Tstd1 : Locus-Region Usf1 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs30809766 MPD | dbSNP | MGI SNP Detail | Chr1:173348290 | f | Tstd1 : Locus-Region Usf1 : mRNA-UTR | 2 | SNP | A | A | A | A | A | A | C | C | A | A | C | A | C | A | A | A | A | A/C |
| rs31541664 MPD | dbSNP | MGI SNP Detail | Chr1:173348455 | f | Tstd1 : Locus-Region Usf1 : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs31541053 MPD | dbSNP | MGI SNP Detail | Chr1:173348480 | f | Tstd1 : Locus-Region Usf1 : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs31541052 MPD | dbSNP | MGI SNP Detail | Chr1:173348556 | f | Tstd1 : Locus-Region Usf1 : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs31541051 MPD | dbSNP | MGI SNP Detail | Chr1:173348587 | f | Tstd1 : Locus-Region Usf1 : mRNA-UTR | 2 | SNP | T | T | T | T | T | A | T | T | T | A | T | A | T | T | T | T | A/T | |
| rs31541050 MPD | dbSNP | MGI SNP Detail | Chr1:173348634 | f | Tstd1 : Locus-Region Usf1 : mRNA-UTR | 1 | SNP | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A/T | ||
| rs31541049 MPD | dbSNP | MGI SNP Detail | Chr1:173348645 | f | Tstd1 : Locus-Region Usf1 : mRNA-UTR | 1 | SNP | A | A | A | A | A | G | A | A | G | A | G | A | A | A | A | A/G | ||
| rs31541048 MPD | dbSNP | MGI SNP Detail | Chr1:173348695 | f | Tstd1 : Locus-Region Usf1 : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs31541047 MPD | dbSNP | MGI SNP Detail | Chr1:173348753 | f | Tstd1 : Locus-Region Usf1 : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | A | A | G | A | G | A | A | A | A | A/G | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs31541046 MPD | dbSNP | MGI SNP Detail | Chr1:173348954 | f | Tstd1 : Locus-Region Usf1 : Locus-Region | 2 | SNP | G | G | A | G | G | G | A | G | A | G | A | G | A | G | G | A | G | A/G |
| rs31541045 MPD | dbSNP | MGI SNP Detail | Chr1:173349057 | f | Tstd1 : Locus-Region Usf1 : Locus-Region | 1 | SNP | C | C | T | C | C | T | C | T | C | C | C | C | C | C | T | C/T | ||
| rs31541044 MPD | dbSNP | MGI SNP Detail | Chr1:173349128 | f | Tstd1 : Locus-Region Usf1 : Locus-Region | 2 | SNP | A | A | A | A | A | A | G | G | A | A | G | A | G | A | A | A | A | A/G |
| rs31540183 MPD | dbSNP | MGI SNP Detail | Chr1:173349212 | f | Tstd1 : mRNA-UTR Usf1 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs31540182 MPD | dbSNP | MGI SNP Detail | Chr1:173349244 | f | Tstd1 : mRNA-UTR Usf1 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs31540181 MPD | dbSNP | MGI SNP Detail | Chr1:173349283 | f | Tstd1 : Intron Usf1 : Locus-Region | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | G/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/22/2013 MGI 5.13 |
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