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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Wnt5a wingless-related MMTV integration site 5A MGI:98958 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs16808069 MPD | dbSNP | MGI SNP Detail | Chr14:29316692 | r | Wnt5a : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G/T | |||||||||||
| rs16808068 MPD | dbSNP | MGI SNP Detail | Chr14:29316719 | r | Wnt5a : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C/T | ||||||||||
| rs16808072 MPD | dbSNP | MGI SNP Detail | Chr14:29317066 | f | Wnt5a : Locus-Region | 1 | SNP | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A/G | ||||||||||
| rs16808073 MPD | dbSNP | MGI SNP Detail | Chr14:29317098 | f | Wnt5a : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | A/G | ||||||||||
| rs16808074 MPD | dbSNP | MGI SNP Detail | Chr14:29317130 | f | Wnt5a : Locus-Region | 1 | SNP | A | A | A | A | A | A | G | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A/G | ||||||||||
| rs16808075 MPD | dbSNP | MGI SNP Detail | Chr14:29317196 | f | Wnt5a : Locus-Region | 1 | IN-DEL | - | - | C | - | - | - | - | -/C | |||||||||||||||||||||||||
| rs16808076 MPD | dbSNP | MGI SNP Detail | Chr14:29317346 | f | Wnt5a : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C/G | ||||||||||
| rs16808077 MPD | dbSNP | MGI SNP Detail | Chr14:29317371 | f | Wnt5a : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | A/G | ||||||||||
| rs16808078 MPD | dbSNP | MGI SNP Detail | Chr14:29317372 | f | Wnt5a : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | A/G | ||||||||||
| rs16808079 MPD | dbSNP | MGI SNP Detail | Chr14:29317410 | f | Wnt5a : Locus-Region | 1 | Mixed | C | C | C | C | C | C | A | C | C | C | - | C | C | C | C | C | C | C | - | C | C | C | -/A/C | ||||||||||
| rs16808080 MPD | dbSNP | MGI SNP Detail | Chr14:29317412 | f | Wnt5a : Locus-Region | 1 | IN-DEL | - | - | - | - | - | - | G | - | - | - | G | - | - | - | - | - | - | - | G | - | - | - | -/G | ||||||||||
| rs16808081 MPD | dbSNP | MGI SNP Detail | Chr14:29317494 | f | Wnt5a : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | A/G | |||||||||||
| rs16808086 MPD | dbSNP | MGI SNP Detail | Chr14:29317630 | r | Wnt5a : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | C/G | |||||||||||||||
| rs16808085 MPD | dbSNP | MGI SNP Detail | Chr14:29317938 | r | Wnt5a : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | |||||||||||||||||
| rs16808084 MPD | dbSNP | MGI SNP Detail | Chr14:29318026 | r | Wnt5a : Locus-Region | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | T | T | T | A/T | |||||||||||||||||
| rs16808083 MPD | dbSNP | MGI SNP Detail | Chr14:29318033 | r | Wnt5a : Locus-Region | 1 | SNP | A | A | A | A | A | A | C | A | A | C | A | A | A | A | A | A | A | A/C | |||||||||||||||
| rs16808082 MPD | dbSNP | MGI SNP Detail | Chr14:29318085 | r | Wnt5a : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||||||||||||||||
| rs16808087 MPD | dbSNP | MGI SNP Detail | Chr14:29318332 | f | Wnt5a : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C/T | |||||||||||
| rs16808088 MPD | dbSNP | MGI SNP Detail | Chr14:29318501 | f | Wnt5a : Locus-Region | 1 | IN-DEL | - | - | - | C | - | - | - | C | - | - | - | - | - | - | - | - | - | -/C | |||||||||||||||
| rs16808089 MPD | dbSNP | MGI SNP Detail | Chr14:29318502 | f | Wnt5a : Locus-Region | 1 | IN-DEL | - | - | - | - | - | G | - | - | - | G | - | - | - | - | - | - | - | G | - | - | - | -/G | |||||||||||
| rs16808090 MPD | dbSNP | MGI SNP Detail | Chr14:29318503 | f | Wnt5a : Locus-Region | 1 | IN-DEL | - | - | - | - | - | C | - | - | - | C | - | - | - | - | - | - | - | C | - | - | - | -/C | |||||||||||
| rs16808091 MPD | dbSNP | MGI SNP Detail | Chr14:29318663 | f | Wnt5a : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | |||||||||||||||
| rs30874419 MPD | dbSNP | MGI SNP Detail | Chr14:29320241 | f | Gm2670 : Locus-Region Wnt5a : Intron | 1 | SNP | T | T | C | C | C/T | ||||||||||||||||||||||||||||
| rs16808095 MPD | dbSNP | MGI SNP Detail | Chr14:29324666 | r | Gm2670 : Locus-Region Wnt5a : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | C/G | ||||||||||
| rs16808094 MPD | dbSNP | MGI SNP Detail | Chr14:29324765 | r | Gm2670 : Locus-Region Wnt5a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A/G | ||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs16808093 MPD | dbSNP | MGI SNP Detail | Chr14:29324969 | r | Gm2670 : Locus-Region Wnt5a : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G/T | ||||||||||
| rs16808092 MPD | dbSNP | MGI SNP Detail | Chr14:29325001 | r | Gm2670 : Locus-Region Wnt5a : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | A/G | ||||||||||
| rs16808097 MPD | dbSNP | MGI SNP Detail | Chr14:29325197 | r | Wnt5a : Intron | 1 | SNP | C | C | C | C | C | C | G | C | C | C | G | C | C | C | C | C | C | C | G | C | C | C | C/G | ||||||||||
| rs16808096 MPD | dbSNP | MGI SNP Detail | Chr14:29325387 | r | Wnt5a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A | A | A/T | ||||||||||
| rs16808099 MPD | dbSNP | MGI SNP Detail | Chr14:29325971 | r | Wnt5a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A/G | |||||||||||
| rs16808098 MPD | dbSNP | MGI SNP Detail | Chr14:29326252 | r | Wnt5a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C/T | |||||||||||
| rs16808106 MPD | dbSNP | MGI SNP Detail | Chr14:29331164 | r | Wnt5a : Intron | 1 | SNP | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A/G | ||||||||||
| rs16808105 MPD | dbSNP | MGI SNP Detail | Chr14:29331250 | r | Wnt5a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | A/C | ||||||||||
| rs16808104 MPD | dbSNP | MGI SNP Detail | Chr14:29331251 | r | Wnt5a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | A/C | ||||||||||
| rs16808103 MPD | dbSNP | MGI SNP Detail | Chr14:29331272 | r | Wnt5a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C/T | ||||||||||
| rs16808102 MPD | dbSNP | MGI SNP Detail | Chr14:29331453 | r | Wnt5a : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | A/G | ||||||||||
| rs16808101 MPD | dbSNP | MGI SNP Detail | Chr14:29331494 | r | Wnt5a : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C/G | ||||||||||
| rs16808100 MPD | dbSNP | MGI SNP Detail | Chr14:29331497 | r | Wnt5a : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | A/G | ||||||||||
| rs51868076 MPD | dbSNP | MGI SNP Detail | Chr14:29331701 | f | Wnt5a : Coding-Synonymous | 1 | SNP | T | T | T | C | T | T | T | T | C/T | ||||||||||||||||||||||||
| rs51594096 MPD | dbSNP | MGI SNP Detail | Chr14:29334809 | f | Wnt5a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||||||||||||||||
| rs50801080 MPD | dbSNP | MGI SNP Detail | Chr14:29334890 | f | Wnt5a : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | |||||||||||||||||
| rs46649089 MPD | dbSNP | MGI SNP Detail | Chr14:29334928 | f | Wnt5a : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | |||||||||||||||||
| rs46924737 MPD | dbSNP | MGI SNP Detail | Chr14:29335218 | f | Wnt5a : Intron | 1 | SNP | G | G | G | G | G | G | G | G | C | G | G | G | G | C | G | C/G | |||||||||||||||||
| rs49110561 MPD | dbSNP | MGI SNP Detail | Chr14:29335256 | f | Wnt5a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||||||||||||||||
| rs52563339 MPD | dbSNP | MGI SNP Detail | Chr14:29335308 | f | Wnt5a : Intron | 1 | SNP | A | A | A | G | A | A | G | A | A | A | A | G | G | A/G | |||||||||||||||||||
| rs16808122 MPD | dbSNP | MGI SNP Detail | Chr14:29335350 | r | Wnt5a : Intron | 1 | IN-DEL | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | - | -/A | ||||||||||||
| rs16808121 MPD | dbSNP | MGI SNP Detail | Chr14:29335432 | r | Wnt5a : Intron | 1 | IN-DEL | G | G | G | G | G | G | G | G | G | G | - | G | G | G | G | G | G | G | G | G | G | G | -/G | ||||||||||
| rs16808117 MPD | dbSNP | MGI SNP Detail | Chr14:29335437 | r | Wnt5a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A/G | ||||||||||
| rs16808118 MPD | dbSNP | MGI SNP Detail | Chr14:29335437 | r | Wnt5a : Intron | 1 | SNP | G | G | G | G | G | G | A | G | G | G | A | G | G | G | G | G | G | A | G | G | G | A/G | |||||||||||
| rs16808119 MPD | dbSNP | MGI SNP Detail | Chr14:29335437 | r | Wnt5a : Intron | 1 | Mixed | G | G | G | G | G | G | G | G | G | G | - | G | G | G | G | G | G | G | A | G | G | G | -/A/G | ||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs16808120 MPD | dbSNP | MGI SNP Detail | Chr14:29335437 | r | Wnt5a : Intron | 1 | IN-DEL | A | A | A | A | A | A | A | A | A | A | - | A | A | A | A | A | A | A | A | A | A | A | -/A | ||||||||||
| rs16808116 MPD | dbSNP | MGI SNP Detail | Chr14:29335491 | r | Wnt5a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A/T | ||||||||||
| rs51226847 MPD | dbSNP | MGI SNP Detail | Chr14:29335491 | f | Wnt5a : Intron | 1 | SNP | T | T | T | T | T | T | T | T | A | T | T | T | T | A | T | A/T | |||||||||||||||||
| rs16808115 MPD | dbSNP | MGI SNP Detail | Chr14:29335503 | r | Wnt5a : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | G/T | ||||||||||
| rs47906164 MPD | dbSNP | MGI SNP Detail | Chr14:29335503 | f | Wnt5a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A | A | A | C | A | A/C | |||||||||||||||||
| rs16808114 MPD | dbSNP | MGI SNP Detail | Chr14:29335535 | r | Wnt5a : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | C/T | ||||||||||
| rs16808113 MPD | dbSNP | MGI SNP Detail | Chr14:29335539 | r | Wnt5a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C/T | ||||||||||
| rs16808112 MPD | dbSNP | MGI SNP Detail | Chr14:29335559 | r | Wnt5a : Intron | 1 | SNP | T | T | T | T | T | T | C | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | C/T | ||||||||||
| rs47090754 MPD | dbSNP | MGI SNP Detail | Chr14:29335559 | f | Wnt5a : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | |||||||||||||||||
| rs16808111 MPD | dbSNP | MGI SNP Detail | Chr14:29335619 | r | Wnt5a : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A | G | G | G | G | G | G | A/G | |||||||||||
| rs16808110 MPD | dbSNP | MGI SNP Detail | Chr14:29335640 | r | Wnt5a : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | A/G | |||||||||||
| rs16808109 MPD | dbSNP | MGI SNP Detail | Chr14:29335654 | r | Wnt5a : Intron | 1 | SNP | G | G | G | G | G | G | A | G | G | G | A | G | G | G | G | G | G | G | A | G | G | G | A/G | ||||||||||
| rs16808108 MPD | dbSNP | MGI SNP Detail | Chr14:29335661 | r | Wnt5a : Intron | 1 | SNP | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A/G | |||||||||||
| rs16808107 MPD | dbSNP | MGI SNP Detail | Chr14:29335718 | r | Wnt5a : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||||||||||||
| rs47586712 MPD | dbSNP | MGI SNP Detail | Chr14:29335793 | f | Wnt5a : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |||||||||||||||||
| rs16808123 MPD | dbSNP | MGI SNP Detail | Chr14:29335802 | f | Wnt5a : Coding-Synonymous | 2 | SNP | G | G | G | G | G | G | A | G | G | A | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | |||||
| rs16808124 MPD | dbSNP | MGI SNP Detail | Chr14:29335813 | f | Wnt5a : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | A/G | |||||||||||||||||
| rs16808125 MPD | dbSNP | MGI SNP Detail | Chr14:29335838 | f | Wnt5a : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||||||||||||||||
| rs16808126 MPD | dbSNP | MGI SNP Detail | Chr14:29335934 | f | Wnt5a : Coding-Synonymous | 2 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | |
| rs16808127 MPD | dbSNP | MGI SNP Detail | Chr14:29336135 | f | Wnt5a : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C/T | ||||||||||
| rs49293334 MPD | dbSNP | MGI SNP Detail | Chr14:29336380 | f | Wnt5a : mRNA-UTR | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||||||||||||||||
| rs51854633 MPD | dbSNP | MGI SNP Detail | Chr14:29336496 | f | Wnt5a : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | ||||||||||||||||||
| rs46986824 MPD | dbSNP | MGI SNP Detail | Chr14:29336556 | f | Wnt5a : mRNA-UTR | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | |||||||||||||||||
| rs49323262 MPD | dbSNP | MGI SNP Detail | Chr14:29336831 | f | Wnt5a : mRNA-UTR | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G/T | |||||||||||||||||
| rs46618709 MPD | dbSNP | MGI SNP Detail | Chr14:29337016 | f | Wnt5a : mRNA-UTR | 1 | SNP | T | T | T | T | T | G | T | T | G | T | T | T | T | G | G | G/T | |||||||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs47931460 MPD | dbSNP | MGI SNP Detail | Chr14:29337044 | f | Wnt5a : mRNA-UTR | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | G | A/G | |||||||||||||||||
| rs49380659 MPD | dbSNP | MGI SNP Detail | Chr14:29337180 | f | Wnt5a : mRNA-UTR | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||||||||||||||||
| rs49006093 MPD | dbSNP | MGI SNP Detail | Chr14:29337404 | f | Wnt5a : mRNA-UTR | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | T | A | A | A/T | |||||||||||||||||
| rs50154841 MPD | dbSNP | MGI SNP Detail | Chr14:29337451 | f | Wnt5a : mRNA-UTR | 1 | SNP | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | A/T | |||||||||||||||||
| rs48330848 MPD | dbSNP | MGI SNP Detail | Chr14:29337704 | f | Wnt5a : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | G | T | G | G | G | G | T | G | G/T | |||||||||||||||||
| rs47597254 MPD | dbSNP | MGI SNP Detail | Chr14:29337946 | f | Wnt5a : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||||||||||||||||
| rs51242253 MPD | dbSNP | MGI SNP Detail | Chr14:29338290 | f | Wnt5a : mRNA-UTR | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | |||||||||||||||||
| rs46653366 MPD | dbSNP | MGI SNP Detail | Chr14:29338456 | f | Wnt5a : mRNA-UTR | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |||||||||||||||||
| rs49047122 MPD | dbSNP | MGI SNP Detail | Chr14:29338525 | f | Wnt5a : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C/T | ||||||||||||||||||
| rs52006271 MPD | dbSNP | MGI SNP Detail | Chr14:29338728 | f | Wnt5a : Locus-Region | 1 | SNP | T | T | T | T | T | G | T | T | G | T | T | T | T | G | T | G/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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