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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Vim vimentin MGI:98932 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs28262436 MPD | dbSNP | MGI SNP Detail | Chr2:13493614 | f | Vim : Locus-Region | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A/G | ||||||||||||
| rs28262435 MPD | dbSNP | MGI SNP Detail | Chr2:13493786 | f | Vim : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | G | T | T | T | T | T | G/T | ||||||||||
| rs28262434 MPD | dbSNP | MGI SNP Detail | Chr2:13493858 | f | Vim : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A/G | ||||||||||
| rs28262433 MPD | dbSNP | MGI SNP Detail | Chr2:13493963 | f | Vim : Locus-Region | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | A | A/G | ||||||||||
| rs28262432 MPD | dbSNP | MGI SNP Detail | Chr2:13494057 | f | Vim : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | A | T | T | T | T | T | T | A/T | ||||||||||
| rs28262431 MPD | dbSNP | MGI SNP Detail | Chr2:13494127 | f | Vim : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C/G | ||||||||||
| rs28262430 MPD | dbSNP | MGI SNP Detail | Chr2:13494496 | f | Vim : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A/T | ||||||||||
| rs28262429 MPD | dbSNP | MGI SNP Detail | Chr2:13494581 | f | Vim : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T | ||||||||||
| rs28262428 MPD | dbSNP | MGI SNP Detail | Chr2:13494819 | f | Vim : Locus-Region | 1 | SNP | A | A | A | A | A | C | A | A | C | A | A | A | A | C | A | A/C | |||||||||
| rs28262427 MPD | dbSNP | MGI SNP Detail | Chr2:13495394 | f | Vim : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G/T | |||||||||
| rs28262426 MPD | dbSNP | MGI SNP Detail | Chr2:13495712 | f | Vim : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||||||||||
| rs28262425 MPD | dbSNP | MGI SNP Detail | Chr2:13495738 | f | Vim : mRNA-UTR | 1 | SNP | A | A | A | A | A | C | A | A | C | A | A | A | A | A | A | A/C | |||||||||
| rs28262424 MPD | dbSNP | MGI SNP Detail | Chr2:13495779 | f | Vim : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C/T | ||||||||||
| rs8238688 MPD | dbSNP | MGI SNP Detail | Chr2:13496223 | r | Vim : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | T | T | C/T | ||||||||||||||
| rs8238687 MPD | dbSNP | MGI SNP Detail | Chr2:13496259 | r | Vim : Coding-Synonymous | 1 | SNP | T | T | T | T | T | G | T | T | T | T | G/T | ||||||||||||||
| rs8238686 MPD | dbSNP | MGI SNP Detail | Chr2:13496451 | r | Vim : Coding-Synonymous | 1 | SNP | C | C | C | C | C | A | C | C | C | C | A/C | ||||||||||||||
| rs8238685 MPD | dbSNP | MGI SNP Detail | Chr2:13496472 | r | Vim : Coding-Synonymous | 2 | SNP | G | G | G | G | G | G | G | C | G | G | C | G | G | G | G | G | G | G | G | G | C/G | ||||
| rs8238691 MPD | dbSNP | MGI SNP Detail | Chr2:13496505 | r | Vim : Coding-Synonymous | 1 | SNP | C | C | C | C | G | C | C | C | C | C/G | |||||||||||||||
| rs8238690 MPD | dbSNP | MGI SNP Detail | Chr2:13496514 | r | Vim : Coding-Synonymous | 1 | SNP | C | C | C | C | T | C | C | C | C | C/T | |||||||||||||||
| rs8238689 MPD | dbSNP | MGI SNP Detail | Chr2:13496748 | r | Vim : Intron | 1 | IN-DEL | C | C | C | C | - | C | C | C | C | -/C | |||||||||||||||
| rs8238694 MPD | dbSNP | MGI SNP Detail | Chr2:13496881 | r | Vim : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A/G | ||||||||||||||
| rs8238693 MPD | dbSNP | MGI SNP Detail | Chr2:13497041 | r | Vim : Intron | 2 | SNP | T | T | T | T | T | T | T | G | T | T | G | T | T | T | T | T | T | T | T | T | G/T | ||||
| rs8238692 MPD | dbSNP | MGI SNP Detail | Chr2:13497045 | r | Vim : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | C/T | ||||||||||||||
| rs28262423 MPD | dbSNP | MGI SNP Detail | Chr2:13497201 | f | Vim : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||||||||
| rs8238697 MPD | dbSNP | MGI SNP Detail | Chr2:13497304 | r | Vim : Intron | 1 | SNP | G | G | G | G | G | C | G | G | G | G | C/G | ||||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs8238696 MPD | dbSNP | MGI SNP Detail | Chr2:13497356 | r | Vim : Intron | 2 | SNP | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||||
| rs8238695 MPD | dbSNP | MGI SNP Detail | Chr2:13497399 | r | Vim : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C/T | ||||||||||||||
| rs28262422 MPD | dbSNP | MGI SNP Detail | Chr2:13497681 | f | Vim : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | |||||||||
| rs8238698 MPD | dbSNP | MGI SNP Detail | Chr2:13497858 | r | Vim : Intron | 1 | SNP | C | C | C | C | C | G | C | C | C | C | C/G | ||||||||||||||
| rs8238702 MPD | dbSNP | MGI SNP Detail | Chr2:13497999 | r | Vim : Intron | 1 | SNP | G | G | G | G | G | C | G | G | G | G | C/G | ||||||||||||||
| rs8238701 MPD | dbSNP | MGI SNP Detail | Chr2:13498057 | r | Vim : Intron | 1 | IN-DEL | C | C | C | C | C | - | C | C | C | C | -/C | ||||||||||||||
| rs8238700 MPD | dbSNP | MGI SNP Detail | Chr2:13498058 | r | Vim : Intron | 1 | SNP | C | C | C | C | C | G | C | C | C | C | C/G | ||||||||||||||
| rs8238699 MPD | dbSNP | MGI SNP Detail | Chr2:13498080 | r | Vim : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | C/T | ||||||||||||||
| rs28262421 MPD | dbSNP | MGI SNP Detail | Chr2:13498226 | f | Vim : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C/G | |||||||||
| rs8238707 MPD | dbSNP | MGI SNP Detail | Chr2:13498268 | r | Vim : Intron | 2 | SNP | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | T | T | C | C/T | ||||
| rs8238703 MPD | dbSNP | MGI SNP Detail | Chr2:13498414 | r | Vim : Intron | 4 | Mixed | - | ? | - | - | - | T | - | - | - | - | -/A/T | ||||||||||||||
| rs28262420 MPD | dbSNP | MGI SNP Detail | Chr2:13498820 | f | Vim : Intron | 1 | SNP | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | G/T | |||||||||
| rs28262419 MPD | dbSNP | MGI SNP Detail | Chr2:13498832 | f | Vim : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | A | A/C | ||||||||||
| rs28262418 MPD | dbSNP | MGI SNP Detail | Chr2:13498937 | f | Vim : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||||||||
| rs28262417 MPD | dbSNP | MGI SNP Detail | Chr2:13499460 | f | Vim : Intron | 1 | SNP | G | G | G | G | G | G | G | C | G | G | G | G | G | G | C/G | ||||||||||
| rs8238709 MPD | dbSNP | MGI SNP Detail | Chr2:13500173 | r | Vim : Intron | 2 | SNP | C | C | C | C | C | C | C | G | C | C | G | C | C | C | C | C | C | C | C | G | C/G | ||||
| rs8238708 MPD | dbSNP | MGI SNP Detail | Chr2:13500202 | r | Vim : Intron | 2 | SNP | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | A | A | A | A | G | A/G | ||||
| rs28262416 MPD | dbSNP | MGI SNP Detail | Chr2:13500431 | f | Vim : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | G | A/G | |||||||||||
| rs28262415 MPD | dbSNP | MGI SNP Detail | Chr2:13500487 | f | Vim : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | |||||||||
| rs28262414 MPD | dbSNP | MGI SNP Detail | Chr2:13500634 | f | Vim : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | A | A | A/G | |||||||||
| rs28262413 MPD | dbSNP | MGI SNP Detail | Chr2:13500701 | f | Vim : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | |||||||||
| rs28262412 MPD | dbSNP | MGI SNP Detail | Chr2:13501040 | f | Vim : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | |||||||||
| rs28262411 MPD | dbSNP | MGI SNP Detail | Chr2:13501140 | f | Vim : Coding-Synonymous | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A/G | ||||||||||||
| rs28262410 MPD | dbSNP | MGI SNP Detail | Chr2:13501198 | f | Vim : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | A/G | |||||||||||
| rs28262409 MPD | dbSNP | MGI SNP Detail | Chr2:13501854 | f | Vim : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | A | C | C | C | C | C | C | A/C | ||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs28262408 MPD | dbSNP | MGI SNP Detail | Chr2:13502118 | f | Vim : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T | |||||||||
| rs28262407 MPD | dbSNP | MGI SNP Detail | Chr2:13502516 | f | Vim : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | A/T | |||||||||
| rs8238731 MPD | dbSNP | MGI SNP Detail | Chr2:13502738 | r | Vim : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | C/T | ||||||||||||||
| rs8238730 MPD | dbSNP | MGI SNP Detail | Chr2:13502793 | r | Vim : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | G/T | ||||||||||||||
| rs8238729 MPD | dbSNP | MGI SNP Detail | Chr2:13502803 | r | Vim : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C/T | ||||||||||||||
| rs8238728 MPD | dbSNP | MGI SNP Detail | Chr2:13502831 | r | Vim : Intron | 1 | IN-DEL | G | G | G | G | G | - | G | G | G | G | -/G | ||||||||||||||
| rs8238727 MPD | dbSNP | MGI SNP Detail | Chr2:13502843 | r | Vim : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | A/G | ||||||||||||||
| rs8238726 MPD | dbSNP | MGI SNP Detail | Chr2:13502852 | r | Vim : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A/G | ||||||||||||||
| rs8238725 MPD | dbSNP | MGI SNP Detail | Chr2:13502853 | r | Vim : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | A/G | ||||||||||||||
| rs8238724 MPD | dbSNP | MGI SNP Detail | Chr2:13502856 | r | Vim : Intron | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G/T | ||||||||||||||
| rs28262406 MPD | dbSNP | MGI SNP Detail | Chr2:13502978 | f | Vim : Intron | 1 | SNP | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | ||||||||||
| rs28262405 MPD | dbSNP | MGI SNP Detail | Chr2:13503020 | f | Vim : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | A | A | A/G | |||||||||
| rs28262404 MPD | dbSNP | MGI SNP Detail | Chr2:13503071 | f | Vim : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | |||||||||
| rs28262403 MPD | dbSNP | MGI SNP Detail | Chr2:13503301 | f | Vim : Coding-Synonymous | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | A/G | |||||||||
| rs8238732 MPD | dbSNP | MGI SNP Detail | Chr2:13503481 | r | Vim : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C/T | ||||||||||||||
| rs8238734 MPD | dbSNP | MGI SNP Detail | Chr2:13503987 | r | Vim : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A/G | ||||||||||||||
| rs8238733 MPD | dbSNP | MGI SNP Detail | Chr2:13503991 | r | Vim : Intron | 1 | IN-DEL | - | - | - | - | - | T | - | - | - | - | -/T | ||||||||||||||
| rs16786038 MPD | dbSNP | MGI SNP Detail | Chr2:13504263 | f | Vim : mRNA-UTR | 2 | SNP | A | A | A | A | A | A | A | G | A | A | G | A | A | G | A | A | A | A | A | A | A | A | A | A | A/G |
| rs28262402 MPD | dbSNP | MGI SNP Detail | Chr2:13504664 | f | Vim : Locus-Region | 1 | SNP | C | C | C | C | C | A | C | C | A | C | C | C | C | C | C | A/C | |||||||||
| rs28262401 MPD | dbSNP | MGI SNP Detail | Chr2:13504755 | f | Vim : Locus-Region | 1 | SNP | A | A | A | C | A | C | A | A | A | A/C |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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