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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Smpd1
sphingomyelin phosphodiesterase 1, acid lysosomal
MGI:98325

41 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs36667312
MPD | dbSNP | MGI SNP Detail
Chr7:105552434fGm39063 : within coordinates of
Smpd1 : Locus-Region
2SNPT TTTTTTTCT TT CTCTC/T
rs49075727
MPD | dbSNP | MGI SNP Detail
Chr7:105552450fGm39063 : within coordinates of
Smpd1 : Locus-Region
1SNP  A    A       G   A/G
rs36483469
MPD | dbSNP | MGI SNP Detail
Chr7:105552973fGm39063 : within coordinates of
Smpd1 : Locus-Region
1SNPT TTTT TTA  TT  TA A/T
rs37222663
MPD | dbSNP | MGI SNP Detail
Chr7:105553912fGm39063 : within coordinates of
Smpd1 : Locus-Region
1SNPT TTTTCTTTC TT  CTTC/T
rs36518281
MPD | dbSNP | MGI SNP Detail
Chr7:105553986fGm39063 : within coordinates of
Smpd1 : Locus-Region
1SNPA AAAACAAAC AA  CAAA/C
rs244283293
MPD | dbSNP | MGI SNP Detail
Chr7:105554009fGm39063 : within coordinates of
Smpd1 : Locus-Region
1SNP           T  C    C/T
rs37274596
MPD | dbSNP | MGI SNP Detail
Chr7:105554673fSmpd1 : Coding-NonSynonymous1SNPT TTTTTTATT TT  TTAA/T
rs40107552
MPD | dbSNP | MGI SNP Detail
Chr7:105554779fSmpd1 : Coding-NonSynonymous1SNPA AAAAAAATA AA  ATAA/T
rs39426687
MPD | dbSNP | MGI SNP Detail
Chr7:105555160fSmpd1 : Intron1SNPG GGGGGGAGG GG  GGAA/G
rs36886073
MPD | dbSNP | MGI SNP Detail
Chr7:105555390fSmpd1 : Coding-Synonymous1SNPC CCCCCCTTC CC  CTTC/T
rs38735901
MPD | dbSNP | MGI SNP Detail
Chr7:105555836fSmpd1 : Coding-Synonymous1SNPA AAAAAAACA AA  ACAA/C
rs36698840
MPD | dbSNP | MGI SNP Detail
Chr7:105555977fSmpd1 : Coding-Synonymous1SNPT TTTTCTTTC TT  CTTC/T
rs36876322
MPD | dbSNP | MGI SNP Detail
Chr7:105556081fSmpd1 : Intron1SNPA AAAAAAAGA AA  AGAA/G
rs36467578
MPD | dbSNP | MGI SNP Detail
Chr7:105556084fSmpd1 : Intron1SNPT TTTTGTT G TT    TG/T
rs37057005
MPD | dbSNP | MGI SNP Detail
Chr7:105556150fSmpd1 : Intron1SNPC CCCCCCCTC CC  CTCC/T
rs38477120
MPD | dbSNP | MGI SNP Detail
Chr7:105556208fSmpd1 : Intron1SNPT TTTTTTTTT TT  TATA/T
rs37699146
MPD | dbSNP | MGI SNP Detail
Chr7:105556346fSmpd1 : Intron1SNPA AAAAGAAGG AA  GGAA/G
rs36399604
MPD | dbSNP | MGI SNP Detail
Chr7:105556468fSmpd1 : Intron1SNPT TTTTCTTCC TT   CTC/T
rs36522797
MPD | dbSNP | MGI SNP Detail
Chr7:105556486fSmpd1 : Intron1SNPT TTTTCTCCC TT  CCCC/T
rs37409092
MPD | dbSNP | MGI SNP Detail
Chr7:105556779fSmpd1 : Intron1SNPC CCCCCCCTC CC  CTCC/T
rs36512647
MPD | dbSNP | MGI SNP Detail
Chr7:105556819fSmpd1 : Intron1SNPT TTTTGTTTG TT  GTTG/T
rs38870284
MPD | dbSNP | MGI SNP Detail
Chr7:105557249fSmpd1 : Intron1SNPG GGGGGGGAG GG  GAGA/G
rs36779670
MPD | dbSNP | MGI SNP Detail
Chr7:105557330fSmpd1 : Intron1SNPA AAAAAATAA AA  AATA/T
rs36537076
MPD | dbSNP | MGI SNP Detail
Chr7:105557473fSmpd1 : Coding-Synonymous1SNPA AAAACAAAC AA  CAAA/C
rs36536565
MPD | dbSNP | MGI SNP Detail
Chr7:105557511fSmpd1 : Intron1SNPG GGGGAGGGA GG  AGGA/G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs37892230
MPD | dbSNP | MGI SNP Detail
Chr7:105557558fSmpd1 : Intron1SNPC CCCCCCCTC CC  CTCC/T
rs36809225
MPD | dbSNP | MGI SNP Detail
Chr7:105557563fSmpd1 : Intron1SNPG GGGGAGGGA GG  AGGA/G
rs36711700
MPD | dbSNP | MGI SNP Detail
Chr7:105557620fSmpd1 : Intron1SNPG GGGGAGGGA GG  AGGA/G
rs38556044
MPD | dbSNP | MGI SNP Detail
Chr7:105557658fSmpd1 : Coding-Synonymous1SNPC CCCCCCCTC CC  CTCC/T
rs36353338
MPD | dbSNP | MGI SNP Detail
Chr7:105558000fApbb1 : Locus-Region
Smpd1 : Coding-Synonymous
1SNPT TTTTCTC C TT    CC/T
rs37417101
MPD | dbSNP | MGI SNP Detail
Chr7:105558183fApbb1 : Locus-Region
Smpd1 : mRNA-UTR
1SNP  CCCCGCC G C   G  C/G
rs36881361
MPD | dbSNP | MGI SNP Detail
Chr7:105558297fApbb1 : Locus-Region
Smpd1 : mRNA-UTR
1SNPA AAAAAAA T AA  T AA/T
rs13464070
MPD | dbSNP | MGI SNP Detail
Chr7:105558628rApbb1 : mRNA-UTR
Smpd1 : Intron
1SNP  AAAAGA  G AA  G AA/G
rs46655888
MPD | dbSNP | MGI SNP Detail
Chr7:105559162fApbb1 : Coding-Synonymous
Smpd1 : 774 bp downstream of
1SNP AA    A           A
rs46062248
MPD | dbSNP | MGI SNP Detail
Chr7:105559458fApbb1 : Coding-Synonymous
Smpd1 : 1070 bp downstream of
1SNP GG    G           G
rs36590754
MPD | dbSNP | MGI SNP Detail
Chr7:105559519fApbb1 : Coding-NonSynonymous
Smpd1 : 1131 bp downstream of
2SNPGGGGGGGGG A GG  G GA/G
rs51890469
MPD | dbSNP | MGI SNP Detail
Chr7:105559641fApbb1 : Intron
Smpd1 : 1253 bp downstream of
1SNP GG                G
rs36288831
MPD | dbSNP | MGI SNP Detail
Chr7:105559648fApbb1 : Intron
Smpd1 : 1260 bp downstream of
1SNP  AA  TAA    T  T  A/T
rs36462795
MPD | dbSNP | MGI SNP Detail
Chr7:105559686fApbb1 : Intron
Smpd1 : 1298 bp downstream of
2SNPT TTTTGTT G TT    TG/T
rs38447782
MPD | dbSNP | MGI SNP Detail
Chr7:105559743fApbb1 : Intron
Smpd1 : 1355 bp downstream of
1SNPA AAAAGAA G A   G  A/G
rs38576980
MPD | dbSNP | MGI SNP Detail
Chr7:105559848fApbb1 : Intron
Smpd1 : 1460 bp downstream of
1SNPC CCCCCCT C CC  C TC/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/21/2015
MGI 5.21
The Jackson Laboratory