Genome Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details).

Symbol Name ID

Shh sonic hedgehog MGI:98297

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17 matching SNPs displayed

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Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.

SNP ID (dbSNP Build 128)	Map Position (NCBI Build 37)		Gene : dbSNP Function Class	Assays (ss)	Variation Type										Allele Summary (all strains)
rs33674412 MPD | dbSNP | MGI SNP Detail	Chr5:28781725	f	Shh : Locus-Region	1	SNP	A	A	A			G				A/G
rs29729942 MPD | dbSNP | MGI SNP Detail	Chr5:28782770	f	Shh : Locus-Region	1	SNP		T	C			C				C/T
rs33485416 MPD | dbSNP | MGI SNP Detail	Chr5:28782771	f	Shh : Locus-Region	1	SNP		G	A			A				A/G
rs33068028 MPD | dbSNP | MGI SNP Detail	Chr5:28783068	f	Shh : Locus-Region	1	SNP		T	C			C	C			C/T
rs29682823 MPD | dbSNP | MGI SNP Detail	Chr5:28783285	f	Shh : Locus-Region	1	SNP	G	G	G			A	A			A/G
rs33133952 MPD | dbSNP | MGI SNP Detail	Chr5:28785198	f	Shh : Intron	1	SNP		G	C			G	G			C/G
rs33181672 MPD | dbSNP | MGI SNP Detail	Chr5:28785438	f	Shh : Intron	1	SNP		T	G			T	T			G/T
rs33541793 MPD | dbSNP | MGI SNP Detail	Chr5:28787688	f	Shh : Intron	1	SNP			C			T	T			C/T
rs33746193 MPD | dbSNP | MGI SNP Detail	Chr5:28788928	f	Shh : Intron	1	SNP		A	A			G	G			A/G
rs33214222 MPD | dbSNP | MGI SNP Detail	Chr5:28788950	f	Shh : Intron	1	SNP		T	T			A	A			A/T
rs33285952 MPD | dbSNP | MGI SNP Detail	Chr5:28789661	f	Shh : Intron	2	SNP		G	A	A		G	G	G		A/G
rs33560337 MPD | dbSNP | MGI SNP Detail	Chr5:28789831	f	Shh : Intron	1	SNP		T	G			G	G			G/T
rs33259009 MPD | dbSNP | MGI SNP Detail	Chr5:28790039	f	Shh : Intron	1	SNP		C	C			T	T			C/T
rs29727180 MPD | dbSNP | MGI SNP Detail	Chr5:28790088	f	Shh : Intron	1	SNP	A	A	A			G	G			A/G
rs33735948 MPD | dbSNP | MGI SNP Detail	Chr5:28790569	f	Shh : Intron	1	SNP	A	A	G			A	A			A/G
rs33682898 MPD | dbSNP | MGI SNP Detail	Chr5:28791779	f	Shh : Intron	1	SNP			G			A				A/G
rs37496005 MPD | dbSNP | MGI SNP Detail	Chr5:28792575	f	Shh : Intron	1	SNP				A	T			A	A	A/T