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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Rag2 recombination activating gene 2 MGI:97849 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs32894545 MPD | dbSNP | MGI SNP Detail | Chr2:101463325 | f | B230118H07Rik : Intron Rag2 : Locus-Region | 1 | SNP | A | A | C | A | A | A/C | ||||||||||||
| rs33068518 MPD | dbSNP | MGI SNP Detail | Chr2:101463526 | f | B230118H07Rik : Intron Rag2 : Locus-Region | 1 | SNP | T | T | A | T | T | A/T | ||||||||||||
| rs27362190 MPD | dbSNP | MGI SNP Detail | Chr2:101463754 | f | B230118H07Rik : Intron Rag2 : Locus-Region | 1 | SNP | C | A | C | C | C | C | C | C | C | C | A | C | C | C | A/C | |||
| rs27362189 MPD | dbSNP | MGI SNP Detail | Chr2:101463870 | f | B230118H07Rik : Intron Rag2 : Locus-Region | 2 | SNP | A | A | G | A | A | A | A | G | A | A | G | A | A | G | A | G | A | A/G |
| rs27362188 MPD | dbSNP | MGI SNP Detail | Chr2:101464210 | f | B230118H07Rik : Intron Rag2 : Locus-Region | 2 | SNP | C | C | A | C | C | C | C | C | C | A | C | C | A | C | A | C | A/C | |
| rs27362187 MPD | dbSNP | MGI SNP Detail | Chr2:101464444 | f | B230118H07Rik : Intron Rag2 : Locus-Region | 2 | SNP | A | A | G | A | A | A | A | A | A | G | A | A | G | A | G | A | A/G | |
| rs27362186 MPD | dbSNP | MGI SNP Detail | Chr2:101464461 | f | B230118H07Rik : Intron Rag2 : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | T | A | A | A | A | T | A | A | A/T | ||
| rs27362185 MPD | dbSNP | MGI SNP Detail | Chr2:101464543 | f | B230118H07Rik : Intron Rag2 : Locus-Region | 2 | SNP | G | G | A | G | G | G | G | G | G | G | G | G | A | G | G | G | A/G | |
| rs27362184 MPD | dbSNP | MGI SNP Detail | Chr2:101464739 | f | B230118H07Rik : Intron Rag2 : Locus-Region | 1 | SNP | T | C | T | T | T | T | T | T | T | T | C | T | T | T | C/T | |||
| rs27362183 MPD | dbSNP | MGI SNP Detail | Chr2:101464856 | f | B230118H07Rik : Intron Rag2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | A | G | G | A/G | ||
| rs27362182 MPD | dbSNP | MGI SNP Detail | Chr2:101465288 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | T | C | T | T | T | T | T | C | T | T | T | C | T | C/T | ||||
| rs27362181 MPD | dbSNP | MGI SNP Detail | Chr2:101465378 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | C | T | C | C | C | C | C | C | C | C | T | C | C | C | C/T | |||
| rs27362180 MPD | dbSNP | MGI SNP Detail | Chr2:101465393 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |||
| rs27362179 MPD | dbSNP | MGI SNP Detail | Chr2:101465402 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | A | G | A | A | A | A | A | G | A | A | G | A | A | A/G | ||||
| rs27362178 MPD | dbSNP | MGI SNP Detail | Chr2:101465724 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | C | T | C | C | C | C | C | T | C | C | T | C | T | C | C/T | |||
| rs27362177 MPD | dbSNP | MGI SNP Detail | Chr2:101465755 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | G | A | G | G | G | G | G | A | G | G | A | G | A | G | A/G | |||
| rs27362176 MPD | dbSNP | MGI SNP Detail | Chr2:101466279 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | A | G | A | A | A | A | A | G | A | A | G | A | G | A | A/G | |||
| rs27362175 MPD | dbSNP | MGI SNP Detail | Chr2:101466297 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | T | C | T | T | T | T | T | C | T | T | C | T | C | T | C/T | |||
| rs27362174 MPD | dbSNP | MGI SNP Detail | Chr2:101466674 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | G | A | G | G | G | G | G | A | G | G | A | G | A | G | A/G | |||
| rs27362173 MPD | dbSNP | MGI SNP Detail | Chr2:101466909 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | A | C | A | A | A | A | A | C | A | A | C | A | C | A | A/C | |||
| rs27362172 MPD | dbSNP | MGI SNP Detail | Chr2:101466953 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | T | C | T | T | T | T | T | C | T | T | C | T | C | T | C/T | |||
| rs27362171 MPD | dbSNP | MGI SNP Detail | Chr2:101466994 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | G | A | G | G | G | G | G | G | G | G | G | A | G | G | G | A/G | ||
| rs27362170 MPD | dbSNP | MGI SNP Detail | Chr2:101467017 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||
| rs27362169 MPD | dbSNP | MGI SNP Detail | Chr2:101467218 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | ||
| rs27362168 MPD | dbSNP | MGI SNP Detail | Chr2:101467262 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | C | T | C | C | C | C | C | C | T | C | C | T | C | T | C | C/T | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27362167 MPD | dbSNP | MGI SNP Detail | Chr2:101467950 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | C | G | C | C | C | C | C | C | C | C | G | C | C | C | C/G | |||
| rs33646183 MPD | dbSNP | MGI SNP Detail | Chr2:101468206 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | T | C | T | T | C/T | |||||||||||||
| rs33431035 MPD | dbSNP | MGI SNP Detail | Chr2:101468283 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | C | T | C | C | C/T | |||||||||||||
| rs27362166 MPD | dbSNP | MGI SNP Detail | Chr2:101468377 | f | B230118H07Rik : Intron Rag2 : Intron | 2 | SNP | A | A | C | A | A | A | A | A | A | A | A | A | C | A | A | A | A/C | |
| rs29521244 MPD | dbSNP | MGI SNP Detail | Chr2:101468470 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | G | A | G | G | A/G | |||||||||||||
| rs33550528 MPD | dbSNP | MGI SNP Detail | Chr2:101468491 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | T | C | T | C/T | ||||||||||||||
| rs27362165 MPD | dbSNP | MGI SNP Detail | Chr2:101468582 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | C | T | C | C | C | C | C | C | C | C | T | C | C | C | C/T | |||
| rs32922951 MPD | dbSNP | MGI SNP Detail | Chr2:101468648 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | G | T | G/T | |||||||||||||||
| rs27362164 MPD | dbSNP | MGI SNP Detail | Chr2:101468764 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |||
| rs27362163 MPD | dbSNP | MGI SNP Detail | Chr2:101468886 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | ||
| rs27362162 MPD | dbSNP | MGI SNP Detail | Chr2:101468958 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | ||
| rs27362161 MPD | dbSNP | MGI SNP Detail | Chr2:101469011 | f | B230118H07Rik : Intron Rag2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | T | G | G | G | G | T | G | G/T | ||
| rs27362160 MPD | dbSNP | MGI SNP Detail | Chr2:101469090 | f | B230118H07Rik : mRNA-UTR Rag2 : Intron | 2 | SNP | G | T | G | G | G | G | G | G | T | G | G | T | G | T | G | G/T | ||
| rs27362159 MPD | dbSNP | MGI SNP Detail | Chr2:101469123 | f | B230118H07Rik : mRNA-UTR Rag2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | T | A | A/T | ||
| rs27362158 MPD | dbSNP | MGI SNP Detail | Chr2:101469221 | f | B230118H07Rik : Locus-Region Rag2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | T | G | G | G | G | T | G | G/T | ||
| rs27362157 MPD | dbSNP | MGI SNP Detail | Chr2:101470142 | f | Rag2 : Coding-Synonymous | 1 | SNP | C | T | C | C | C | C | C | C | C | C | C | T | C | C | C | C/T | ||
| rs27362156 MPD | dbSNP | MGI SNP Detail | Chr2:101470207 | f | Rag2 : Coding-NonSynonymous | 1 | SNP | G | A | G | G | G | G | G | G | G | G | A | G | G | G | A/G | |||
| rs27362155 MPD | dbSNP | MGI SNP Detail | Chr2:101470379 | f | Rag2 : Coding-Synonymous | 2 | SNP | A | A | G | A | A | A | A | A | A | A | A | A | G | A | A | A | A/G | |
| rs27362154 MPD | dbSNP | MGI SNP Detail | Chr2:101470553 | f | Rag2 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||
| rs27362153 MPD | dbSNP | MGI SNP Detail | Chr2:101470577 | f | Rag2 : Coding-NonSynonymous | 2 | SNP | T | T | G | T | T | T | T | T | T | G | T | T | G | T | G | T | G/T | |
| rs33512329 MPD | dbSNP | MGI SNP Detail | Chr2:101470724 | f | Rag2 : Coding-Synonymous | 1 | SNP | A | G | A | A/G | ||||||||||||||
| rs27362152 MPD | dbSNP | MGI SNP Detail | Chr2:101470765 | f | Rag2 : Coding-NonSynonymous | 1 | SNP | C | C | C | C | C | C | C | C | G | C | C | C | C | G | C | C/G | ||
| rs27362151 MPD | dbSNP | MGI SNP Detail | Chr2:101470826 | f | Rag2 : Coding-Synonymous | 2 | SNP | C | C | T | C | C | C | C | T | C | C | T | C | C | T | C | T | C | C/T |
| rs27362150 MPD | dbSNP | MGI SNP Detail | Chr2:101471116 | f | Rag2 : mRNA-UTR | 2 | SNP | T | T | C | T | T | T | T | C | T | T | C | T | T | T | C | T | C/T | |
| rs29912172 MPD | dbSNP | MGI SNP Detail | Chr2:101471152 | f | Rag2 : mRNA-UTR | 1 | SNP | A | G | A | A | A/G | |||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27362149 MPD | dbSNP | MGI SNP Detail | Chr2:101471515 | f | Rag2 : mRNA-UTR | 2 | SNP | T | A | T | T | T | T | A | T | T | A | T | T | A | T | A | T | A/T | |
| rs29818547 MPD | dbSNP | MGI SNP Detail | Chr2:101471889 | f | Rag2 : mRNA-UTR | 1 | SNP | A | C | A | A/C | ||||||||||||||
| rs27362148 MPD | dbSNP | MGI SNP Detail | Chr2:101472475 | f | Rag2 : mRNA-UTR | 2 | SNP | T | G | T | T | T | T | T | T | T | T | T | T | G | T | T | T | G/T | |
| rs27362147 MPD | dbSNP | MGI SNP Detail | Chr2:101472577 | f | Rag2 : mRNA-UTR | 2 | SNP | A | G | A | A | A | A | G | A | A | G | A | A | G | A | G | A | A/G | |
| rs27362146 MPD | dbSNP | MGI SNP Detail | Chr2:101472705 | f | Rag2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||
| rs27362145 MPD | dbSNP | MGI SNP Detail | Chr2:101472753 | f | Rag2 : Locus-Region | 1 | SNP | T | C | T | T | T | T | T | T | T | T | T | C | T | T | T | C/T | ||
| rs27362144 MPD | dbSNP | MGI SNP Detail | Chr2:101472775 | f | Rag2 : Locus-Region | 1 | SNP | C | T | C | C | C | T | C | C | T | C | C | T | C | T | C | C/T | ||
| rs29626440 MPD | dbSNP | MGI SNP Detail | Chr2:101472789 | f | Rag2 : Locus-Region | 1 | SNP | A | G | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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