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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Ptgs2 prostaglandin-endoperoxide synthase 2 MGI:97798 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs33663910 MPD | dbSNP | MGI SNP Detail | Chr1:151945501 | f | Ptgs2 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||||||
| rs33663909 MPD | dbSNP | MGI SNP Detail | Chr1:151945565 | f | Ptgs2 : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | G | A | G | A | A | G | A | A/G | |||||||
| rs33663908 MPD | dbSNP | MGI SNP Detail | Chr1:151945613 | f | Ptgs2 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||||||
| rs33663907 MPD | dbSNP | MGI SNP Detail | Chr1:151945665 | f | Ptgs2 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||||||
| rs33663906 MPD | dbSNP | MGI SNP Detail | Chr1:151945786 | f | Ptgs2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | A | G | A | G | G | G | G | A/G | |||||||
| rs33663905 MPD | dbSNP | MGI SNP Detail | Chr1:151945787 | f | Ptgs2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||||||
| rs32793596 MPD | dbSNP | MGI SNP Detail | Chr1:151946003 | f | Ptgs2 : Locus-Region | 2 | SNP | A | A | C | A | A | C | A | C | C | A | C | A | C | C | A | C | A | A/C | |||||
| rs33663904 MPD | dbSNP | MGI SNP Detail | Chr1:151946088 | f | Ptgs2 : Locus-Region | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | G/T | |||||||
| rs32230433 MPD | dbSNP | MGI SNP Detail | Chr1:151946104 | f | Ptgs2 : Locus-Region | 2 | SNP | G | G | T | G | G | T | G | T | T | G | T | G | T | T | G | T | G | G/T | |||||
| rs31620789 MPD | dbSNP | MGI SNP Detail | Chr1:151946158 | f | Ptgs2 : Locus-Region | 2 | SNP | C | C | T | C | C | T | C | T | T | C | T | C | T | T | C | T | C | C/T | |||||
| rs33663013 MPD | dbSNP | MGI SNP Detail | Chr1:151946171 | f | Ptgs2 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||||||
| rs33663012 MPD | dbSNP | MGI SNP Detail | Chr1:151946177 | f | Ptgs2 : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A/C | ||||||||
| rs33663011 MPD | dbSNP | MGI SNP Detail | Chr1:151946221 | f | Ptgs2 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | T | C | T | C | C | C | C | C/T | |||||||
| rs33663010 MPD | dbSNP | MGI SNP Detail | Chr1:151946399 | f | Ptgs2 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | G/T | |||||||
| rs33663009 MPD | dbSNP | MGI SNP Detail | Chr1:151946536 | f | Ptgs2 : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | C | T | C | T | T | C | T | C/T | |||||||
| rs33663008 MPD | dbSNP | MGI SNP Detail | Chr1:151946580 | f | Ptgs2 : Locus-Region | 1 | SNP | T | T | T | T | T | C | C | T | T | T | T | T | T | T | T | C/T | |||||||
| rs33663007 MPD | dbSNP | MGI SNP Detail | Chr1:151947287 | f | Ptgs2 : mRNA-UTR | 1 | SNP | G | G | G | G | G | A | G | G | A | G | A | G | G | G | G | A/G | |||||||
| rs30469796 MPD | dbSNP | MGI SNP Detail | Chr1:151947433 | f | Ptgs2 : Intron | 1 | SNP | A | G | A | G | A/G | ||||||||||||||||||
| rs33663006 MPD | dbSNP | MGI SNP Detail | Chr1:151947570 | f | Ptgs2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||||||
| rs33663005 MPD | dbSNP | MGI SNP Detail | Chr1:151947775 | f | Ptgs2 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | A | T | A | T | T | T | T | A/T | |||||||
| rs33663004 MPD | dbSNP | MGI SNP Detail | Chr1:151947848 | f | Ptgs2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | T | A | A | A | A | A/T | |||||||
| rs33662213 MPD | dbSNP | MGI SNP Detail | Chr1:151947910 | f | Ptgs2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | G | A | A | A | A | A/G | |||||||
| rs33662212 MPD | dbSNP | MGI SNP Detail | Chr1:151947937 | f | Ptgs2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||||||
| rs32559831 MPD | dbSNP | MGI SNP Detail | Chr1:151948631 | f | Ptgs2 : Intron | 2 | SNP | A | T | A | A | T | A | A | T | A | A | A | A | T | A | A | A | A/T | ||||||
| rs30798100 MPD | dbSNP | MGI SNP Detail | Chr1:151948652 | f | Ptgs2 : Intron | 2 | SNP | C | G | C | C | G | C | G | G | C | G | C | G | G | C | G | C | C/G | ||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs33662211 MPD | dbSNP | MGI SNP Detail | Chr1:151948683 | f | Ptgs2 : Intron | 1 | SNP | G | G | G | G | G | G | G | C | G | C | G | G | G | G | C/G | ||||||||
| rs33662210 MPD | dbSNP | MGI SNP Detail | Chr1:151948823 | f | Ptgs2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | A | G | G | G | G | A/G | |||||||
| rs33662209 MPD | dbSNP | MGI SNP Detail | Chr1:151948965 | f | Ptgs2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | C/T | |||||||
| rs33662208 MPD | dbSNP | MGI SNP Detail | Chr1:151949227 | f | Ptgs2 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | A | C | A | C | C | C | C | A/C | |||||||
| rs33662207 MPD | dbSNP | MGI SNP Detail | Chr1:151949431 | f | Ptgs2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||||||
| rs33662206 MPD | dbSNP | MGI SNP Detail | Chr1:151949622 | f | Ptgs2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | A | G | G | A | G | A/G | |||||||
| rs33662205 MPD | dbSNP | MGI SNP Detail | Chr1:151949711 | f | Ptgs2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | |||||||||
| rs33662204 MPD | dbSNP | MGI SNP Detail | Chr1:151949715 | f | Ptgs2 : Intron | 1 | SNP | A | A | A | A | A | T | A | A | T | A | T | A | A | A | A/T | ||||||||
| rs32774401 MPD | dbSNP | MGI SNP Detail | Chr1:151950027 | f | Ptgs2 : Intron | 2 | SNP | A | A | G | A | A | G | A | G | G | A | G | A | G | G | A | G | A | A/G | |||||
| rs33668980 MPD | dbSNP | MGI SNP Detail | Chr1:151950080 | f | Ptgs2 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | A | C | C | C | A | C | A/C | ||||||||
| rs31523808 MPD | dbSNP | MGI SNP Detail | Chr1:151950333 | f | Ptgs2 : Intron | 2 | SNP | T | G | T | T | G | T | G | G | T | G | T | G | G | T | T | G/T | |||||||
| rs33668979 MPD | dbSNP | MGI SNP Detail | Chr1:151950370 | f | Ptgs2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | A | G | G | G | G | A/G | |||||||
| rs33668978 MPD | dbSNP | MGI SNP Detail | Chr1:151950430 | f | Ptgs2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | |||||||
| rs33668977 MPD | dbSNP | MGI SNP Detail | Chr1:151950485 | f | Ptgs2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||||||
| rs33668976 MPD | dbSNP | MGI SNP Detail | Chr1:151951313 | f | Ptgs2 : Intron | 1 | SNP | A | A | A | A | T | A | A | T | A | T | A | A | A | A/T | |||||||||
| rs33668975 MPD | dbSNP | MGI SNP Detail | Chr1:151951350 | f | Ptgs2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||||||
| rs8238843 MPD | dbSNP | MGI SNP Detail | Chr1:151951371 | f | Ptgs2 : Intron | 2 | SNP | C | C | T | C | C | T | C | T | T | C | C | T | C/T | ||||||||||
| rs8238844 MPD | dbSNP | MGI SNP Detail | Chr1:151951372 | f | Ptgs2 : Intron | 3 | SNP | A | A | G | A | A | A | G | A | G | G | A | G | A | A | A | G | G | G | A | G | A | A/G | |
| rs33668974 MPD | dbSNP | MGI SNP Detail | Chr1:151951426 | f | Ptgs2 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||||||
| rs33667753 MPD | dbSNP | MGI SNP Detail | Chr1:151951435 | f | Ptgs2 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||||||
| rs8238845 MPD | dbSNP | MGI SNP Detail | Chr1:151951626 | f | Ptgs2 : Coding-NonSynonymous | 1 | SNP | T | A | A | A | A/T | ||||||||||||||||||
| rs33667752 MPD | dbSNP | MGI SNP Detail | Chr1:151951709 | f | Ptgs2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||||||
| rs33667751 MPD | dbSNP | MGI SNP Detail | Chr1:151951796 | f | Ptgs2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||||||
| rs8238847 MPD | dbSNP | MGI SNP Detail | Chr1:151951961 | r | Ptgs2 : Intron | 3 | SNP | A | A | C | A | A | A | C | A | A | C | A | A | A | A | A | C | C | A | A | A | A/C | ||
| rs8238846 MPD | dbSNP | MGI SNP Detail | Chr1:151952025 | r | Ptgs2 : Intron | 2 | SNP | A | A | A | A | A | A | G | A | A | G | A | A | G | A | A | A | A | A | A/G | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs8238854 MPD | dbSNP | MGI SNP Detail | Chr1:151952309 | r | Ptgs2 : Intron | 5 | Mixed | G | G | G | G | G | - | G | G | G | G | -/A/G | ||||||||||||
| rs8238853 MPD | dbSNP | MGI SNP Detail | Chr1:151952378 | r | Ptgs2 : Intron | 2 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | A/G | ||
| rs8238852 MPD | dbSNP | MGI SNP Detail | Chr1:151952390 | r | Ptgs2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | C/T | ||||||||||||
| rs8238851 MPD | dbSNP | MGI SNP Detail | Chr1:151952391 | r | Ptgs2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C/T | ||||||||||||
| rs33667750 MPD | dbSNP | MGI SNP Detail | Chr1:151952395 | f | Ptgs2 : Intron | 1 | SNP | G | G | G | G | G | G | G | A | G | A | G | G | G | G | A/G | ||||||||
| rs8238850 MPD | dbSNP | MGI SNP Detail | Chr1:151952397 | r | Ptgs2 : Intron | 1 | IN-DEL | - | - | - | - | - | A | - | - | - | - | -/A | ||||||||||||
| rs8238849 MPD | dbSNP | MGI SNP Detail | Chr1:151952416 | r | Ptgs2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C/T | ||||||||||||
| rs8238848 MPD | dbSNP | MGI SNP Detail | Chr1:151952435 | r | Ptgs2 : Intron | 1 | SNP | T | T | T | T | C | T | T | T | T | C/T | |||||||||||||
| rs33667749 MPD | dbSNP | MGI SNP Detail | Chr1:151952457 | f | Ptgs2 : Intron | 1 | SNP | G | G | G | G | G | G | G | A | G | A | G | G | G | G | A/G | ||||||||
| rs33667748 MPD | dbSNP | MGI SNP Detail | Chr1:151952490 | f | Ptgs2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | C | T | T | T | T | C/T | |||||||
| rs8238859 MPD | dbSNP | MGI SNP Detail | Chr1:151952525 | f | Ptgs2 : Coding-Synonymous | 2 | SNP | A | A | A | A | A | A | G | A | A | G | A | A | A | G | A | A | A | A | A/G | ||||
| rs8238860 MPD | dbSNP | MGI SNP Detail | Chr1:151952615 | f | Ptgs2 : Coding-Synonymous | 2 | SNP | G | G | G | G | G | G | A | G | G | A | G | G | G | A | G | G | G | G | A/G | ||||
| rs8238861 MPD | dbSNP | MGI SNP Detail | Chr1:151952926 | f | Ptgs2 : mRNA-UTR | 1 | SNP | A | A | A | A | A | G | A | A | A/G | ||||||||||||||
| rs33667747 MPD | dbSNP | MGI SNP Detail | Chr1:151952927 | f | Ptgs2 : mRNA-UTR | 1 | SNP | T | T | T | T | T | T | T | T | G | T | T | T | T | T | G/T | ||||||||
| rs33667746 MPD | dbSNP | MGI SNP Detail | Chr1:151953224 | f | Ptgs2 : mRNA-UTR | 1 | SNP | T | T | T | T | T | T | T | T | C | T | C | T | T | T | T | C/T | |||||||
| rs8238862 MPD | dbSNP | MGI SNP Detail | Chr1:151953268 | f | Ptgs2 : mRNA-UTR | 2 | SNP | C | C | C | C | C | C | T | C | C | T | C | T | C | C | C | T | C | C/T | |||||
| rs33667745 MPD | dbSNP | MGI SNP Detail | Chr1:151953537 | f | Ptgs2 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | G | A | G | A | G | G | G | G | A/G | |||||||
| rs33667744 MPD | dbSNP | MGI SNP Detail | Chr1:151953597 | f | Ptgs2 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G/T | |||||||
| rs8238863 MPD | dbSNP | MGI SNP Detail | Chr1:151953722 | r | Ptgs2 : mRNA-UTR | 1 | SNP | A | A | A | A | C | A | A | A/C | |||||||||||||||
| rs33666513 MPD | dbSNP | MGI SNP Detail | Chr1:151953733 | f | Ptgs2 : mRNA-UTR | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |||||||
| rs8238864 MPD | dbSNP | MGI SNP Detail | Chr1:151954070 | f | Ptgs2 : mRNA-UTR | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | C/T | |||||||||||
| rs8238865 MPD | dbSNP | MGI SNP Detail | Chr1:151954116 | f | Ptgs2 : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C/T | |||||||||||
| rs8238866 MPD | dbSNP | MGI SNP Detail | Chr1:151954124 | f | Ptgs2 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | A | G | G | G | A/G | ||||||||||||
| rs8238867 MPD | dbSNP | MGI SNP Detail | Chr1:151954146 | f | Ptgs2 : mRNA-UTR | 1 | IN-DEL | - | - | - | - | - | - | - | C | - | - | - | -/C | |||||||||||
| rs8238868 MPD | dbSNP | MGI SNP Detail | Chr1:151954162 | f | Ptgs2 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | A | G | G | G | A/G | ||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs8238869 MPD | dbSNP | MGI SNP Detail | Chr1:151954217 | f | Ptgs2 : mRNA-UTR | 1 | IN-DEL | - | - | - | - | - | A | - | - | - | - | - | -/A | |||||||||||
| rs8238870 MPD | dbSNP | MGI SNP Detail | Chr1:151954253 | f | Ptgs2 : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C/T | |||||||||||
| rs33666512 MPD | dbSNP | MGI SNP Detail | Chr1:151954413 | f | Ptgs2 : mRNA-UTR | 1 | SNP | A | A | A | A | G | A | A | G | A | G | A | A | G | A | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 06/05/2013 MGI 5.13 |
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