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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Pdha1 pyruvate dehydrogenase E1 alpha 1 MGI:97532 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs29308068 MPD | dbSNP | MGI SNP Detail | ChrX:156558488 | f | Pdha1 : Locus-Region | 1 | SNP | C | C | C | T | C | C | C | C | C | T | C | C | C | C | T | C/T |
| rs29308067 MPD | dbSNP | MGI SNP Detail | ChrX:156558558 | f | Pdha1 : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T |
| rs29308066 MPD | dbSNP | MGI SNP Detail | ChrX:156558755 | f | Pdha1 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G |
| rs29308065 MPD | dbSNP | MGI SNP Detail | ChrX:156558792 | f | Pdha1 : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T |
| rs29308064 MPD | dbSNP | MGI SNP Detail | ChrX:156559308 | f | Pdha1 : Locus-Region | 1 | SNP | A | A | A | G | A | A | A | A | A | G | A | A | A | A | G | A/G |
| rs29307513 MPD | dbSNP | MGI SNP Detail | ChrX:156559391 | f | Pdha1 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T |
| rs29307512 MPD | dbSNP | MGI SNP Detail | ChrX:156559629 | f | Pdha1 : Locus-Region | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | A/C |
| rs29307511 MPD | dbSNP | MGI SNP Detail | ChrX:156559659 | f | Pdha1 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G |
| rs29307510 MPD | dbSNP | MGI SNP Detail | ChrX:156559759 | f | Pdha1 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G |
| rs29307509 MPD | dbSNP | MGI SNP Detail | ChrX:156559797 | f | Pdha1 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T |
| rs29307508 MPD | dbSNP | MGI SNP Detail | ChrX:156559815 | f | Pdha1 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T |
| rs29307507 MPD | dbSNP | MGI SNP Detail | ChrX:156559949 | f | Pdha1 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G |
| rs29307506 MPD | dbSNP | MGI SNP Detail | ChrX:156560034 | f | Pdha1 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T |
| rs29307505 MPD | dbSNP | MGI SNP Detail | ChrX:156560039 | f | Pdha1 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | A/T |
| rs29307504 MPD | dbSNP | MGI SNP Detail | ChrX:156560109 | f | Pdha1 : Locus-Region | 1 | SNP | A | A | A | G | A | A | A | G | A | A | A | G | A/G | |||
| rs29306863 MPD | dbSNP | MGI SNP Detail | ChrX:156560224 | f | Pdha1 : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T |
| rs29306862 MPD | dbSNP | MGI SNP Detail | ChrX:156560452 | f | Pdha1 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G |
| rs29306861 MPD | dbSNP | MGI SNP Detail | ChrX:156560597 | f | Pdha1 : mRNA-UTR | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G |
| rs29306860 MPD | dbSNP | MGI SNP Detail | ChrX:156560648 | f | Pdha1 : mRNA-UTR | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T |
| rs29306859 MPD | dbSNP | MGI SNP Detail | ChrX:156560749 | f | Pdha1 : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | A/C |
| rs13475438 MPD | dbSNP | MGI SNP Detail | ChrX:156560996 | r | Pdha1 : mRNA-UTR | 1 | SNP | A | A | A | G | A | G | A | A | G | G | A | A | A | G | G | A/G |
| rs29306858 MPD | dbSNP | MGI SNP Detail | ChrX:156561010 | f | Pdha1 : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T |
| rs29306857 MPD | dbSNP | MGI SNP Detail | ChrX:156561226 | f | Pdha1 : mRNA-UTR | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T |
| rs29306856 MPD | dbSNP | MGI SNP Detail | ChrX:156561673 | f | Pdha1 : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T |
| rs29306855 MPD | dbSNP | MGI SNP Detail | ChrX:156561885 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29306854 MPD | dbSNP | MGI SNP Detail | ChrX:156562215 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |
| rs29306293 MPD | dbSNP | MGI SNP Detail | ChrX:156562323 | f | Pdha1 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | T | A | T | A/T |
| rs29306292 MPD | dbSNP | MGI SNP Detail | ChrX:156562514 | f | Pdha1 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G |
| rs29306291 MPD | dbSNP | MGI SNP Detail | ChrX:156562626 | f | Pdha1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G |
| rs29306290 MPD | dbSNP | MGI SNP Detail | ChrX:156562668 | f | Pdha1 : Intron | 1 | SNP | T | T | T | C | T | C | T | T | C | C | T | T | T | C | C | C/T |
| rs29306289 MPD | dbSNP | MGI SNP Detail | ChrX:156563323 | f | Pdha1 : Intron | 1 | SNP | T | T | T | C | T | T | T | T | T | C | T | T | T | T | C/T | |
| rs29306288 MPD | dbSNP | MGI SNP Detail | ChrX:156563412 | f | Pdha1 : Intron | 1 | SNP | G | G | G | A | G | G | G | G | G | A | G | G | G | G | A/G | |
| rs29306287 MPD | dbSNP | MGI SNP Detail | ChrX:156564293 | f | Pdha1 : Intron | 1 | SNP | A | A | A | C | A | A | A | A | C | A | A | A | A | C | A/C | |
| rs29306286 MPD | dbSNP | MGI SNP Detail | ChrX:156564795 | f | Pdha1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G |
| rs29306285 MPD | dbSNP | MGI SNP Detail | ChrX:156564827 | f | Pdha1 : Intron | 1 | SNP | G | G | T | G | T | G | G | T | T | G | G | G | T | T | G/T | |
| rs29306284 MPD | dbSNP | MGI SNP Detail | ChrX:156564853 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | A | C | C | C | C | A | C | A/C |
| rs29305753 MPD | dbSNP | MGI SNP Detail | ChrX:156564873 | f | Pdha1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T |
| rs29305752 MPD | dbSNP | MGI SNP Detail | ChrX:156564879 | f | Pdha1 : Intron | 1 | SNP | C | C | C | T | C | C | C | C | C | T | C | C | C | C | T | C/T |
| rs29305751 MPD | dbSNP | MGI SNP Detail | ChrX:156565003 | f | Pdha1 : Intron | 1 | SNP | G | G | G | A | G | G | G | G | G | A | G | G | G | G | A | A/G |
| rs29305750 MPD | dbSNP | MGI SNP Detail | ChrX:156565210 | f | Pdha1 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | G/T |
| rs29305749 MPD | dbSNP | MGI SNP Detail | ChrX:156565271 | f | Pdha1 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G |
| rs29305748 MPD | dbSNP | MGI SNP Detail | ChrX:156565685 | f | Pdha1 : Intron | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A/C |
| rs29305747 MPD | dbSNP | MGI SNP Detail | ChrX:156565789 | f | Pdha1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G |
| rs29305746 MPD | dbSNP | MGI SNP Detail | ChrX:156565870 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T |
| rs29305745 MPD | dbSNP | MGI SNP Detail | ChrX:156565924 | f | Pdha1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G |
| rs29305744 MPD | dbSNP | MGI SNP Detail | ChrX:156565964 | f | Pdha1 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G/T |
| rs29305233 MPD | dbSNP | MGI SNP Detail | ChrX:156565995 | f | Pdha1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G |
| rs29305232 MPD | dbSNP | MGI SNP Detail | ChrX:156566304 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T |
| rs29305231 MPD | dbSNP | MGI SNP Detail | ChrX:156566506 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T |
| rs29305230 MPD | dbSNP | MGI SNP Detail | ChrX:156566531 | f | Pdha1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29305229 MPD | dbSNP | MGI SNP Detail | ChrX:156566687 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T |
| rs29305228 MPD | dbSNP | MGI SNP Detail | ChrX:156566758 | f | Pdha1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | C | T | C/T | |
| rs29305227 MPD | dbSNP | MGI SNP Detail | ChrX:156566967 | f | Pdha1 : Intron | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A/C |
| rs29305226 MPD | dbSNP | MGI SNP Detail | ChrX:156566984 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T |
| rs29305225 MPD | dbSNP | MGI SNP Detail | ChrX:156567015 | f | Pdha1 : Intron | 1 | SNP | C | C | C | T | C | C | C | C | C | T | C | C | C | C | T | C/T |
| rs29305224 MPD | dbSNP | MGI SNP Detail | ChrX:156567268 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T |
| rs29304703 MPD | dbSNP | MGI SNP Detail | ChrX:156568500 | f | Pdha1 : Intron | 1 | SNP | T | T | T | T | A | T | T | T | T | T | T | T | T | T | A/T | |
| rs33853507 MPD | dbSNP | MGI SNP Detail | ChrX:156569880 | f | Pdha1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G |
| rs29304702 MPD | dbSNP | MGI SNP Detail | ChrX:156570305 | f | Pdha1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G |
| rs29304701 MPD | dbSNP | MGI SNP Detail | ChrX:156570752 | f | Pdha1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | T | A | A/T |
| rs29304700 MPD | dbSNP | MGI SNP Detail | ChrX:156571277 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | A/C |
| rs29304699 MPD | dbSNP | MGI SNP Detail | ChrX:156571451 | f | Pdha1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G |
| rs29304698 MPD | dbSNP | MGI SNP Detail | ChrX:156571492 | f | Pdha1 : Intron | 1 | SNP | C | C | C | T | C | C | C | C | C | C | C | C | C/T | |||
| rs29304697 MPD | dbSNP | MGI SNP Detail | ChrX:156571875 | f | Pdha1 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | C | G | G | G | G | C | G | C/G |
| rs29304696 MPD | dbSNP | MGI SNP Detail | ChrX:156572172 | f | Pdha1 : Intron | 1 | SNP | C | C | T | C | C | C | C | C | C | C | C | C | T | C/T | ||
| rs29304695 MPD | dbSNP | MGI SNP Detail | ChrX:156572217 | f | Pdha1 : Intron | 1 | SNP | A | A | A | G | A | G | A | A | A | A | A | G | G | A/G | ||
| rs29304694 MPD | dbSNP | MGI SNP Detail | ChrX:156572656 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T |
| rs29308723 MPD | dbSNP | MGI SNP Detail | ChrX:156572695 | f | Pdha1 : Intron | 1 | SNP | G | G | G | A | G | G | G | G | G | A | G | G | G | G | A | A/G |
| rs29308722 MPD | dbSNP | MGI SNP Detail | ChrX:156573680 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T |
| rs29308721 MPD | dbSNP | MGI SNP Detail | ChrX:156573783 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | A/C |
| rs29308720 MPD | dbSNP | MGI SNP Detail | ChrX:156573817 | f | Pdha1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | C | G | G | G | G | C | G | C/G |
| rs29308719 MPD | dbSNP | MGI SNP Detail | ChrX:156573968 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs29308718 MPD | dbSNP | MGI SNP Detail | ChrX:156574028 | f | Pdha1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G |
| rs29308717 MPD | dbSNP | MGI SNP Detail | ChrX:156574529 | f | Pdha1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | G | T | T | T | T | G | T | G/T |
| rs29308716 MPD | dbSNP | MGI SNP Detail | ChrX:156574555 | f | Pdha1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A/C | |||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29308715 MPD | dbSNP | MGI SNP Detail | ChrX:156574585 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||
| rs29308714 MPD | dbSNP | MGI SNP Detail | ChrX:156574796 | f | Pdha1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T |
| rs29308423 MPD | dbSNP | MGI SNP Detail | ChrX:156575317 | f | Pdha1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G |
| rs29308422 MPD | dbSNP | MGI SNP Detail | ChrX:156575435 | f | Pdha1 : Intron | 1 | SNP | A | A | A | G | A | A | A | A | A | G | A | A | A | A | G | A/G |
| rs29308421 MPD | dbSNP | MGI SNP Detail | ChrX:156575872 | f | Pdha1 : Intron | 1 | SNP | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs29308420 MPD | dbSNP | MGI SNP Detail | ChrX:156576032 | f | Pdha1 : Intron | 1 | SNP | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs29308419 MPD | dbSNP | MGI SNP Detail | ChrX:156576459 | f | Pdha1 : Locus-Region | 1 | SNP | T | T | T | C | T | C | T | T | C | C | T | T | T | C | C | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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