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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Col1a1
collagen, type I, alpha 1
MGI:88467

95 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs252295017
MPD | dbSNP | MGI SNP Detail
Chr11:94934294f 1SNP                 CTC/T
rs220965988
MPD | dbSNP | MGI SNP Detail
Chr11:94934325f 1SNP                 ACA/C
rs29420191
MPD | dbSNP | MGI SNP Detail
Chr11:94934464f 2SNPC C   T         CCTC/T
rs27060376
MPD | dbSNP | MGI SNP Detail
Chr11:94934877f 4SNPTTTTCCCTCCTTTTTT TCC/T
rs27060375
MPD | dbSNP | MGI SNP Detail
Chr11:94935016f 4SNPGGGGAAAGAAGGGGGG GAA/G
rs27060374
MPD | dbSNP | MGI SNP Detail
Chr11:94935209f 3SNPCCCCT TC TCCCCCCCCTC/T
rs29388866
MPD | dbSNP | MGI SNP Detail
Chr11:94935489f 2SNPC C   T          CTC/T
rs27060373
MPD | dbSNP | MGI SNP Detail
Chr11:94935612f 1SNPGG GGGGGGAGGGGG    A/G
rs27060372
MPD | dbSNP | MGI SNP Detail
Chr11:94935885f 4SNPCCCCTTTC TCCCCCC CTC/T
rs29410504
MPD | dbSNP | MGI SNP Detail
Chr11:94936071f 3SNPG G   C         GGCC/G
rs3711235
MPD | dbSNP | MGI SNP Detail
Chr11:94936516f 5SNPAAAATTTATTAAAAAAAATA/T
rs27060371
MPD | dbSNP | MGI SNP Detail
Chr11:94936733f 2SNPGG  GGGGGGGAGGGG AGA/G
rs27060370
MPD | dbSNP | MGI SNP Detail
Chr11:94937235f 3SNPAA  TTTATTA A AAAATA/T
rs46147376
MPD | dbSNP | MGI SNP Detail
Chr11:94937478f 2SNPT     C         TTCC/T
rs27060369
MPD | dbSNP | MGI SNP Detail
Chr11:94938155f 2SNPAA AGGGAGGAAAAAA AGA/G
rs29458009
MPD | dbSNP | MGI SNP Detail
Chr11:94938283f 2SNPT T   G         TTGG/T
rs29391274
MPD | dbSNP | MGI SNP Detail
Chr11:94938769f 3SNPA A   T         AATA/T
rs29425703
MPD | dbSNP | MGI SNP Detail
Chr11:94939177f 3SNPT T   G         TTGG/T
rs27060368
MPD | dbSNP | MGI SNP Detail
Chr11:94939762f 4SNPAAAAGGGAGGAAAAAAAAGA/G
rs27060367
MPD | dbSNP | MGI SNP Detail
Chr11:94939957f 1SNPAA AAAAAACAAAAAA   A/C
rs27060366
MPD | dbSNP | MGI SNP Detail
Chr11:94939965f 4SNPAAAACCCACCAAAAAA ACA/C
rs27060365
MPD | dbSNP | MGI SNP Detail
Chr11:94940821f 4SNPCCCCTTTCTTCCCCC CCTC/T
rs260504546
MPD | dbSNP | MGI SNP Detail
Chr11:94940864f 1SNP                 AGA/G
rs27060364
MPD | dbSNP | MGI SNP Detail
Chr11:94940867f 1SNPAG GAAAAAAAGAAAA   A/G
rs27060363
MPD | dbSNP | MGI SNP Detail
Chr11:94940893f 4SNPGGGGAAAGGGGGGGGGGGAA/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs241890011
MPD | dbSNP | MGI SNP Detail
Chr11:94940932f 1SNP                 AGA/G
rs29447412
MPD | dbSNP | MGI SNP Detail
Chr11:94941088f 1SNPT T   C            C/T
rs27060362
MPD | dbSNP | MGI SNP Detail
Chr11:94941170f 3SNPA AGGGGAGGAGAGAG GGA/G
rs27060361
MPD | dbSNP | MGI SNP Detail
Chr11:94941227f 1SNPCC CCCCCCGCCCCCC   C/G
rs27060360
MPD | dbSNP | MGI SNP Detail
Chr11:94941375f 4SNPTATATAATAATATTTA AAA/T
rs27060359
MPD | dbSNP | MGI SNP Detail
Chr11:94941460f 4SNPCCCCCTTCTTCCCCCC CTC/T
rs27060358
MPD | dbSNP | MGI SNP Detail
Chr11:94942121f 4SNPGGGG  AG AGGGGGGGGAA/G
rs27060357
MPD | dbSNP | MGI SNP Detail
Chr11:94942180f 4SNPCCCCTTTCCCCCCCCC CTC/T
rs27060356
MPD | dbSNP | MGI SNP Detail
Chr11:94942490f 2SNPTC   CCCCCTCCCT  CCC/T
rs27060355
MPD | dbSNP | MGI SNP Detail
Chr11:94942879f 1SNPCC CCCCCTCCCCCCC   C/T
rs27060354
MPD | dbSNP | MGI SNP Detail
Chr11:94943142f 1SNPCC CCCCCCCCCCCCT   C/T
rs27060353
MPD | dbSNP | MGI SNP Detail
Chr11:94943170f 2SNPCCC TTT TT CCC  C  C/T
rs29400013
MPD | dbSNP | MGI SNP Detail
Chr11:94943239f 2SNPA     C         AACA/C
rs229090587
MPD | dbSNP | MGI SNP Detail
Chr11:94943504f 1SNP                 TCC/T
rs249214540
MPD | dbSNP | MGI SNP Detail
Chr11:94943512f 1SNP                 TGG/T
rs107965503
MPD | dbSNP | MGI SNP Detail
Chr11:94943515f 2SNPC     A         CCAA/C
rs27060352
MPD | dbSNP | MGI SNP Detail
Chr11:94943854f 1SNPTG TTTTTTTTTTGTG   G/T
rs27060351
MPD | dbSNP | MGI SNP Detail
Chr11:94943865f 2SNPCC CTTTCCCCCCCCC CTC/T
rs29467811
MPD | dbSNP | MGI SNP Detail
Chr11:94943892f 2SNPT T   G   T     TTGG/T
rs29457328
MPD | dbSNP | MGI SNP Detail
Chr11:94944238f 3SNPG G   A   G     GAAA/G
rs27060350
MPD | dbSNP | MGI SNP Detail
Chr11:94944369f 1SNPGA GGGGGAGGGGGGG   A/G
rs27060349
MPD | dbSNP | MGI SNP Detail
Chr11:94945088f 2SNPAT TTTTATTATTTAT TTA/T
rs27060348
MPD | dbSNP | MGI SNP Detail
Chr11:94945159f 2SNPCC TCCCCCCCTTTCT TCC/T
rs213073263
MPD | dbSNP | MGI SNP Detail
Chr11:94945317f 1SNP                 GCC/G
rs27060347
MPD | dbSNP | MGI SNP Detail
Chr11:94945448f 2SNPAG GAAAAAAAGGGAG GAA/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs249371473
MPD | dbSNP | MGI SNP Detail
Chr11:94945730f 1SNP                 ATA/T
rs27060346
MPD | dbSNP | MGI SNP Detail
Chr11:94946173f 4SNPGGGGAAAGAAGGGGGG GAA/G
rs29458689
MPD | dbSNP | MGI SNP Detail
Chr11:94946820f 3SNPC     T   C      CTC/T
rs27060345
MPD | dbSNP | MGI SNP Detail
Chr11:94946919f 1SNPCT CCCCCCCCCCCCC   C/T
rs27060344
MPD | dbSNP | MGI SNP Detail
Chr11:94946971f 2SNPGA AGGGGGGGAAAGA AGA/G
rs27060343
MPD | dbSNP | MGI SNP Detail
Chr11:94947192f 1SNPTC TTTTTTTTTTTTT   C/T
rs27060342
MPD | dbSNP | MGI SNP Detail
Chr11:94947562f 4SNPGGGG AAGAAGGGGGGGGAA/G
rs27060341
MPD | dbSNP | MGI SNP Detail
Chr11:94947597f 4SNPGGG AAAGAAGGGGGGGGAA/G
rs29467324
MPD | dbSNP | MGI SNP Detail
Chr11:94948121f 3SNP  G   A   G      GAA/G
rs27060340
MPD | dbSNP | MGI SNP Detail
Chr11:94948476f 4SNPGAGGAAAGAAGGGGGGGGAA/G
rs27060339
MPD | dbSNP | MGI SNP Detail
Chr11:94948847f 1SNPCT CCCCCCCCCCCCC   C/T
rs27060338
MPD | dbSNP | MGI SNP Detail
Chr11:94948854f 1SNPG  GGGGGGAGGGGGG   A/G
rs243903699
MPD | dbSNP | MGI SNP Detail
Chr11:94948897f 1SNP                 AGA/G
rs27060337
MPD | dbSNP | MGI SNP Detail
Chr11:94948978f 4SNPAG AGGGAGGAAAAAAAAGA/G
rs27060336
MPD | dbSNP | MGI SNP Detail
Chr11:94949125f 1SNPAC A AAAAA  AAA    A/C
rs27060335
MPD | dbSNP | MGI SNP Detail
Chr11:94949308f 1SNPGA GGGGGGGGGGGGG   A/G
rs27060334
MPD | dbSNP | MGI SNP Detail
Chr11:94949795f 1SNPTT TTTTTTTTTCTTT   C/T
rs27060333
MPD | dbSNP | MGI SNP Detail
Chr11:94950195f 1SNPCC CCCCCCTCCCCCC   C/T
rs27060332
MPD | dbSNP | MGI SNP Detail
Chr11:94950214f 1SNP C CCCCCCACCCCCC   A/C
rs108914460
MPD | dbSNP | MGI SNP Detail
Chr11:94950610f 1SNPT     A         T  A/T
rs27060331
MPD | dbSNP | MGI SNP Detail
Chr11:94950809f 1SNPGA GGGGGGGGGGGGG   A/G
rs27060330
MPD | dbSNP | MGI SNP Detail
Chr11:94950842f 1SNPGG GGGGGGAGGGGGG   A/G
rs27060329
MPD | dbSNP | MGI SNP Detail
Chr11:94950949f 3SNPTGTTGGGTGGTTTTTTTTGG/T
rs27060328
MPD | dbSNP | MGI SNP Detail
Chr11:94951271f 1SNPAC ACAAA A AAAA    A/C
rs27060327
MPD | dbSNP | MGI SNP Detail
Chr11:94952555f 2SNPAA TAAAAAAATAAAA TAA/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs52293230
MPD | dbSNP | MGI SNP Detail
Chr11:94952681f 1SNPG     T            G/T
rs27060326
MPD | dbSNP | MGI SNP Detail
Chr11:94952736f 2SNPAG AG GA GAAAAAA AGA/G
rs29437096
MPD | dbSNP | MGI SNP Detail
Chr11:94952745f 2SNPC     T          CTC/T
rs29436244
MPD | dbSNP | MGI SNP Detail
Chr11:94953080f 2SNPG     T   G     GGTG/T
rs29407651
MPD | dbSNP | MGI SNP Detail
Chr11:94953097f 2SNPC     T   C     CCTC/T
rs27060325
MPD | dbSNP | MGI SNP Detail
Chr11:94953328f 3SNPTC TCCCTCCTTTTTTTTCC/T
rs29429420
MPD | dbSNP | MGI SNP Detail
Chr11:94953349f 1SNPT     C   T     T  C/T
rs27060324
MPD | dbSNP | MGI SNP Detail
Chr11:94953434f 3SNPGGGGAAAGAAGGGGGGGGAA/G
rs29448516
MPD | dbSNP | MGI SNP Detail
Chr11:94953640f 2SNPA A   G         A  A/G
rs29424898
MPD | dbSNP | MGI SNP Detail
Chr11:94953659f 2SNPA A   G         A  A/G
rs29468777
MPD | dbSNP | MGI SNP Detail
Chr11:94953661f 2SNPT T   A         T  A/T
rs27060323
MPD | dbSNP | MGI SNP Detail
Chr11:94953782f 3SNPGG GAAAGAAGGGGGGGGAA/G
rs29445284
MPD | dbSNP | MGI SNP Detail
Chr11:94954003f 3SNPT     C         TTCC/T
rs27060322
MPD | dbSNP | MGI SNP Detail
Chr11:94954229f 1SNPGG GGGGGGGGGAGGG   A/G
rs29480923
MPD | dbSNP | MGI SNP Detail
Chr11:94954372f 3SNPC C   G         CCGC/G
rs27060321
MPD | dbSNP | MGI SNP Detail
Chr11:94954376f 4SNPA AAGGGA GAAAAAAAAGA/G
rs27060320
MPD | dbSNP | MGI SNP Detail
Chr11:94954414f 4SNPA AAGGGAGGAAAAAAAAGA/G
rs27060319
MPD | dbSNP | MGI SNP Detail
Chr11:94954513f 1SNPCT CCCCCCCCCCCCC   C/T
rs27060318
MPD | dbSNP | MGI SNP Detail
Chr11:94954646f 4SNPGGGGAAAGAAGGGGGGGGAA/G
rs29423225
MPD | dbSNP | MGI SNP Detail
Chr11:94954786f 3SNPT T   C   T     TTCC/T

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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory