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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Htr1a 5-hydroxytryptamine (serotonin) receptor 1A MGI:96273 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs47248975 MPD | dbSNP | MGI SNP Detail | Chr13:106232026 | f | Htr1a : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | C | A | A | A | A | C | A | A/C | |||
| rs50244061 MPD | dbSNP | MGI SNP Detail | Chr13:106232263 | f | Htr1a : Locus-Region | 1 | SNP | T | T | T | T | C | T | C/T | |||||||||||
| rs51699297 MPD | dbSNP | MGI SNP Detail | Chr13:106232368 | f | Htr1a : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||
| rs52356522 MPD | dbSNP | MGI SNP Detail | Chr13:106232477 | f | Htr1a : Locus-Region | 1 | SNP | A | A | G | G | A | G | A | G | A | A/G | ||||||||
| rs29729409 MPD | dbSNP | MGI SNP Detail | Chr13:106233555 | f | Htr1a : Locus-Region | 1 | SNP | C | C | C | C | T | C/T | ||||||||||||
| rs51444617 MPD | dbSNP | MGI SNP Detail | Chr13:106233596 | f | Htr1a : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | |||
| rs50784900 MPD | dbSNP | MGI SNP Detail | Chr13:106233957 | f | Htr1a : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | |||
| rs51551873 MPD | dbSNP | MGI SNP Detail | Chr13:106234177 | f | Htr1a : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | G | A/G | ||||
| rs46606024 MPD | dbSNP | MGI SNP Detail | Chr13:106235845 | f | Htr1a : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | |||
| rs50672409 MPD | dbSNP | MGI SNP Detail | Chr13:106235970 | f | Htr1a : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | A | C | A | A | A | A | C | A | A/C | |||
| rs46552305 MPD | dbSNP | MGI SNP Detail | Chr13:106236112 | f | Htr1a : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | C | C/T | ||||
| rs46798273 MPD | dbSNP | MGI SNP Detail | Chr13:106236161 | f | Htr1a : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||
| rs48695683 MPD | dbSNP | MGI SNP Detail | Chr13:106236557 | f | Htr1a : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | |||
| rs47541178 MPD | dbSNP | MGI SNP Detail | Chr13:106236681 | f | Htr1a : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | A | T | A | A | A | A | T | A | A/T | |||
| rs30095728 MPD | dbSNP | MGI SNP Detail | Chr13:106236797 | f | Htr1a : mRNA-UTR | 1 | SNP | T | C | T | C | C/T | |||||||||||||
| rs46850324 MPD | dbSNP | MGI SNP Detail | Chr13:106236985 | f | Htr1a : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A | A | A | C | A | A/C | ||
| rs46730215 MPD | dbSNP | MGI SNP Detail | Chr13:106237250 | f | Htr1a : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||
| rs48416266 MPD | dbSNP | MGI SNP Detail | Chr13:106237971 | f | Htr1a : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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