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Vav1 Gene Detail
 Symbol
Name
ID
Vav1
vav 1 oncogene
MGI:98923


Nomenclature History
Genetic Map
Chromosome 17
32.7 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 16)

Sequence Map
Chr17:57418538-57467373 bp, + strand
(From Ensembl annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Vav1 ± 2 cM)
Protein SuperFamily: vav transforming protein
TreeFam: TF316171
Sequences
Representative Sequences Length Strain/Species Flank
genomic ENSMUSG00000034116 Ensembl Gene Model | MGI Sequence Detail 48836 C57BL/6J ± Kb
transcript NM_011691 RefSeq | MGI Sequence Detail 4168 C57BL/6
polypeptide P27870 UniProt | EBI | MGI Sequence Detail 845 Not Applicable
For the selected sequences
All sequences(58)
Alleles
and
phenotypes
All alleles(5) : Targeted, knock-out(3) Targeted, other(2)
Homozygous null mutants exhibit defective T cell maturation, interleukin-2 production, and cell cycle progression. Immunoglobulin class switching is also impaired and attributed to defective T cell help.
Polymorphisms RFLP(6) SNPs within 2kb(127 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (18 annotations)
Process immune response, integrin-mediated signaling pathway...
Component intracellular
Function guanyl-nucleotide exchange factor activity, metal ion binding...
External Resources: FuncBase
Expression Literature Summary: (3 records)
Data Summary: Assays (1)    Results (21)    Tissues (5)
Theiler Stages: 15,19
  Assay Type Assays   Results
      RT-PCR 1   21
cDNA source data(42)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(45) cDNA(42) Primer pair(1) Other(2) Antibodies(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000034116
DoTS DT.101347811, DT.101380638, DT.101380639, DT.110559645, DT.97366427, DT.99863524
Consensus CDS Project CCDS28931.1
UniGene 248172
PDB 1F5X, 1GCP, 1GCQ, 1K1Z, 2KBT, 2VRW
DFCI TC1575273, TC1594756, TC1596173, TC1660670
NIA Mouse Gene Index U018150
Entrez Gene 22324
International Mouse Knockout Project Status Vav1
Protein
domains
InterPro ID Description
IPR000219 Dbl homology (DH) domain
IPR000980 SH2 motif
IPR001331 Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001452 Src homology-3 domain
IPR001715 Calponin-like actin-binding
IPR001849 Pleckstrin homology
IPR002219 Protein kinase C-like, phorbol ester/diacylglycerol binding
IPR003096 SM22/calponin
IPR011511 Variant SH3
IPR016146 Calponin-homology
IPR020473 Src homology-3, region
Graphical View of Protein Domain Structure
References
(Earliest) J:18384 Katzav S et al., "vav, a novel human oncogene derived from a locus ubiquitously expressed in hematopoietic cells." EMBO J 1989 Aug;8(8):2283-90
(Latest) J:155962 Ruiz S et al., "The use of knockout mice reveals a synergistic role of the Vav1 and Rasgrf2 gene deficiencies in lymphomagenesis and metastasis." PLoS One 2009;4(12):e8229
All references(110)
Other
accession IDs
MGD-MRK-15381

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory