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Tyrp1 Gene Detail
 Symbol
Name
ID
Tyrp1
tyrosinase-related protein 1
MGI:98881


Nomenclature History
STS D4Mit174
Synonyms isa, TRP-1, TRP1, Tyrp
Genetic Map
Chromosome 4
38.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 255)

Sequence Map
Chr4:80480027-80497623 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; goat; horse; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Tyrp1 ± 2 cM)
Protein SuperFamily: monophenol monooxygenase
TreeFam: TF315865
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000000391 VEGA Gene Model | MGI Sequence Detail 17597 C57BL/6J ± Kb
transcript NM_031202 RefSeq | MGI Sequence Detail 2740 C57BL/6
polypeptide P07147 UniProt | EBI | MGI Sequence Detail 537 Not Applicable
For the selected sequences
All sequences(148)
Alleles
and
phenotypes
All alleles(56) : Spontaneous(8) Chemically induced(21) Radiation induced(27)
The major influence of mutations at this locus is to change eumelanin from a black to a brown pigment in the coat and eyes. Alleles differ in the distribution of brown pigment granules and therefore differ in color intensity.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)   Phenotype Images (6)  
Polymorphisms All PCR and RFLP(13) : PCR(3) RFLP(10) SNPs within 2kb(138 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(25)
Process acetoacetic acid metabolic process, melanin biosynthetic process...
Component integral to membrane, melanosome membrane...
Function copper ion binding, metal ion binding...
External Resources: MouseFunc
Expression Literature Summary: (8 records)
Data Summary: Assays (1)    Results (1)    Tissues (1)    Images (1)
Theiler Stages: 19
  Assay Type Assays   Results
      RNA in situ 1   1
cDNA source data(11)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(26) Genomic(9) cDNA(12) Primer pair(4) Other(1)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000005994
DoTS DT.103564283, DT.110794123, DT.110794136, DT.50315220
DFCI TC1571920, TC1654890
NIA Mouse Gene Index U004439
Entrez Gene 22178
VEGA Gene Model OTTMUSG00000000391
International Mouse Knockout Project Status Tyrp1
Protein
domains
InterPro ID Description
IPR002227 Tyrosinase
IPR008922 Di-copper centre-containing
IPR015559 Dihydroxyindole-2-carboxylic acid oxidase
Graphical View of Protein Domain Structure
References
(Earliest) J:150254 Little CC, "The occurrence of three recognized coat mutations in mice" Am Naturalist 1916;1():335-349
(Latest) J:141035 Anderson MG et al., "Iris phenotypes and pigment dispersion caused by genes influencing pigmentation." Pigment Cell Melanoma Res 2008 Oct;21(5):565-78
All references(271)
Other
accession IDs
MGD-MRK-1491, MGD-MRK-15316, MGD-MRK-23790, MGI:1336195

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory