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Rac1 Gene Detail
 Symbol
Name
ID
Rac1
RAS-related C3 botulinum substrate 1
MGI:97845


Nomenclature History
Synonyms D5Ertd559e
Genetic Map
Chromosome 5
82.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 4)

Sequence Map
Chr5:144266346-144288904 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Rac1 ± 2 cM)
Protein SuperFamily: small GTPase, Rho type
TreeFam: TF101109
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000020705 VEGA Gene Model | MGI Sequence Detail 22559 C57BL/6J ± Kb
transcript NM_009007 RefSeq | MGI Sequence Detail 2284 C57BL/6
polypeptide P63001 UniProt | EBI | MGI Sequence Detail 192 Not Applicable
For the selected sequences
All sequences(38)
Alleles
and
phenotypes
All alleles(40) : Targeted, knock-out(3) Targeted, other(4) Gene trapped(33)
Homozygotes for targeted null mutations exhibit embryonic lethality prior to embryonic day 9.5 with defects in gastrulation. Neutrophil specific knockout mice show defects in inflammatory recruitment and chemotactic responses.
Polymorphisms SNPs within 2kb(136 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (33 annotations)
Process axon guidance, cell adhesion...
Component cell projection, cytoplasm...
Function GTP binding, GTPase activity...
External Resources: FuncBase
Expression Literature Summary: (25 records)
Data Summary: Assays (7)    Results (34)    Tissues (26)    Images (14)
Theiler Stages: 2,3,4,5,15,18,19,20,21,28
  Assay Type Assays   Results
      Western blot 4   7
      RT-PCR 1   12
      RNA in situ 1   6
      Immunohistochemistry 1   9
cDNA source data(21)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(24) Genomic(1) cDNA(21) Primer pair(2) Antibodies(3)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000001847
Consensus CDS Project CCDS19843.1
Entrez Gene 19353
VEGA Gene Model OTTMUSG00000020705
International Mouse Knockout Project Status Rac1
Protein
domains
InterPro ID Description
IPR001806 Ras GTPase
IPR003578 Small GTPase, Rho type
IPR005225 Small GTP-binding protein
IPR013753 Ras
Graphical View of Protein Domain Structure
References
(Earliest) J:724 Moll J et al., "The murine rac1 gene: cDNA cloning, tissue distribution and regulated expression of rac1 mRNA by disassembly of actin microfilaments." Oncogene 1991 May;6(5):863-6
(Latest) J:154975 D'Amico G et al., "Regulation of lymphatic-blood vessel separation by endothelial Rac1." Development 2009 Dec;136(23):4043-53
All references(128)
Other
accession IDs
MGD-MRK-13748, MGI:1261850, MGI:2141016

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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