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Plcb1 Gene Detail
 Symbol
Name
ID
Plcb1
phospholipase C, beta 1
MGI:97613


Nomenclature History
STS D2Hss1
Synonyms 3110043I21Rik, mKIAA0581
Genetic Map
Chromosome 2
76.7 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 8)

Sequence Map
Chr2:134611895-135300994 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Plcb1 ± 2 cM)
Protein SuperFamily: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta
TreeFam: TF313216
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000015592 VEGA Gene Model | MGI Sequence Detail 689100 C57BL/6J ± Kb
transcript NM_019677 RefSeq | MGI Sequence Detail 7116 C57BL/6
polypeptide Q9Z1B3 UniProt | EBI | MGI Sequence Detail 1216 Not Applicable
For the selected sequences
All sequences(45)
Alleles
and
phenotypes
All alleles(2) : Targeted, knock-out(1) Transgenic(1)
Homozygotes for a targeted null mutation exhibit spontaneous seizures and high mortality around 3 weeks of age. Mutant males show exhibit sperm with a reduced acrosome reaction rate and fertilizing capacity in vitro and decreased fertility in vivo.
Associated Human Diseases (2)   Alleles Annotated to Human Diseases (1)  
Polymorphisms RFLP(4) SNPs within 2kb(3872 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process intracellular signaling cascade, lipid catabolic process...
Component cytoplasm
Function calcium ion binding, hydrolase activity...
External Resources: FuncBase
Expression Literature Summary: (3 records)
Data Summary: Assays (2)    Results (140)    Tissues (139)    Images (19)
Theiler Stages: 22,23,28
  Assay Type Assays   Results
      RT-PCR 1   46
      RNA in situ 1   94
cDNA source data(42)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(51) Genomic(4) cDNA(43) Primer pair(2) Other(2)
Microarray probesets(4)
Pathways
phospholipases
Other database
links
EC 3.1.4.11
Ensembl Gene Model ENSMUSG00000051177
DoTS DT.101409861, DT.55283316, DT.91281675, DT.94311219, DT.94361175
Consensus CDS Project CCDS16787.1
UniGene 330607
DFCI TC1579823, TC1591416, TC1617399, TC1641469
NIA Mouse Gene Index U002517
Entrez Gene 18795
VEGA Gene Model OTTMUSG00000015592
International Mouse Knockout Project Status Plcb1
Protein
domains
InterPro ID Description
IPR000008 C2 calcium-dependent membrane targeting
IPR000909 Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 Phospholipase C, phosphoinositol-specific, C-terminal (PLC)
IPR001711 Phospholipase C, phosphatidylinositol-specific, Y domain
IPR008973 C2 calcium/lipid-binding domain, CaLB
IPR009535 Protein of unknown function DUF1154
IPR011992 EF-hand-like domain
IPR014815 PLC-beta, C-terminal
IPR015359 Phospholipase C, phosphoinositol-specific, EF-hand-like
IPR016280 Phosphatidylinositol-4, 5-bisphosphate phosphodiesterase beta
IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
IPR018029 C2 membrane targeting protein
Graphical View of Protein Domain Structure
References
(Earliest) J:30483 Hempel WM et al., "Expression of phospholipase C isozymes by murine B lymphocytes." J Immunol 1991 Jun 1;146(11):3713-20
(Latest) J:151070 McOmish CE et al., "Phospholipase C-beta1 knockout mice exhibit endophenotypes modeling schizophrenia which are rescued by environmental enrichment and clozapine administration." Mol Psychiatry 2008 Jul;13(7):661-72
All references(34)
Other
accession IDs
MGD-MRK-13351, MGI:1920444, MGI:2138844

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/06/2010
MGI_4.32
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