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Prkce Gene Detail
 Symbol
Name
ID
Prkce
protein kinase C, epsilon
MGI:97599


Nomenclature History
Synonyms 5830406C15Rik, PKC[e], Pkce, PKCepsilon
Genetic Map
Chromosome 17
Syntenic
 
Mapping data( 2)
Sequence Map
Chr17:86567125-87057259 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic; rabbit, European; rat    (Mammalian Orthology)
Protein SuperFamily: protein kinase C, delta/epsilon/eta/theta types
TreeFam: TF102004
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000017512 VEGA Gene Model | MGI Sequence Detail 490135 C57BL/6J ± Kb
transcript NM_011104 RefSeq | MGI Sequence Detail 2230 -
polypeptide P16054 UniProt | EBI | MGI Sequence Detail 737 Not Applicable
For the selected sequences
All sequences(20)
Alleles
and
phenotypes
All alleles(6) : Targeted, knock-out(3) Targeted, other(1) Gene trapped(2)
Homozygotes for a targeted null mutation exhibit reduced ethanol self-administration and are more sensitive to the acute behavioral effects of ethanol and other drugs that activate GABA(A) receptors. Mutants show reduced anxiety and stress hormones.
Polymorphisms SNPs within 2kb(2139 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(19)
Process chemosensory behavior, intracellular signaling cascade...
Component cytoplasm, nucleus...
Function ATP binding, calcium-independent protein kinase C activity...
External Resources: MouseFunc
Expression Literature Summary: (13 records)
Data Summary: Assays (3)    Results (18)    Tissues (10)    Images (2)
Theiler Stages: 21,22,23,24,25,26,28
  Assay Type Assays   Results
      Western blot 2   17
      RNA in situ 1   1
cDNA source data(8)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Molecular
reagents
All nucleic(12) cDNA(11) Primer pair(1) Antibodies(2)
Microarray probesets(3)
Other database
links
EC 2.7.11.13
Ensembl Gene Model ENSMUSG00000045038
DoTS DT.87068598, DT.91334334
DFCI TC1588160, TC1602627, TC1694358
NIA Mouse Gene Index U043630, U260054
Entrez Gene 18754
VEGA Gene Model OTTMUSG00000017512
International Mouse Knockout Project Status Prkce
Protein
domains
InterPro ID Description
IPR000008 C2 calcium-dependent membrane targeting
IPR000719 Protein kinase, catalytic domain
IPR000961 AGC-kinase, C-terminal
IPR002219 Protein kinase C-like, phorbol ester/diacylglycerol binding
IPR002290 Serine/threonine-protein kinase domain
IPR008271 Serine/threonine-protein kinase, active site
IPR014376 Protein kinase C, delta/epsilon/eta/theta types
IPR015745 Protein kinase C
IPR017441 Protein kinase, ATP binding site
IPR017442 Serine/threonine-protein kinase-like domain
IPR017892 Protein kinase, C-terminal
IPR018029 C2 membrane targeting protein
IPR020454 Diacylglycerol/phorbol-ester binding
Graphical View of Protein Domain Structure
References
(Earliest) J:10128 Wada H et al., "Cell type-specific expression of the genes for the protein kinase C family: down regulation of mRNAs for PKC alpha and nPKC epsilon upon in vitro differentiation of a mouse neuroblastoma cell line neuro 2a." Biochem Biophys Res Commun 1989 Nov 30;165(1):533-8
(Latest) J:151115 Lesscher HM et al., "Amygdala protein kinase C epsilon controls alcohol consumption." Genes Brain Behav 2009 Jul;8(5):493-9
All references(91)
Other
accession IDs
MGD-MRK-13331, MGI:1914847, MGI:2147156

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
11/20/2009
MGI_4.31
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