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Prkcc Gene Detail
 Symbol
Name
ID
Prkcc
protein kinase C, gamma
MGI:97597


Nomenclature History
Synonyms Pkcc, PKCgamma
Genetic Map
Chromosome 7
2.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 31)

Sequence Map
Chr7:3303916-3331005 bp, + strand
(From Ensembl annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic; rabbit, European; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Prkcc ± 2 cM)
Protein SuperFamily: protein kinase C, alpha/beta/gamma types
Sequences
Representative Sequences Length Strain/Species Flank
genomic ENSMUSG00000078816 Ensembl Gene Model | MGI Sequence Detail 27090 C57BL/6J ± Kb
transcript NM_011102 RefSeq | MGI Sequence Detail 2715 C57BL/6
polypeptide P63318 UniProt | EBI | MGI Sequence Detail 697 Not Applicable
For the selected sequences
All sequences(20)
Alleles
and
phenotypes
All alleles(3) : Targeted, knock-out(1) Targeted, other(1) Gene trapped(1)
Depending upon genetic background, homozygous null mice show mild deficits in spatial learning and contextual conditioning. Genotype-dependent reductions in sensitivity to the effects of ethanol on righting reflex and hypothermia, in neuropathic pain after injury, and in anxiety are also evident.
Polymorphisms RFLP(7) SNPs within 2kb(65 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (20 annotations)
Process chemosensory behavior, intracellular signaling cascade...
Component cytoplasm, dendrite...
Function ATP binding, calcium ion binding...
External Resources: FuncBase
Expression Literature Summary: (24 records)
Data Summary: Assays (3)    Results (101)    Tissues (52)    Images (3)
Theiler Stages: 21,22,23,24,25,26,28
  Assay Type Assays   Results
      Western blot 1   9
      RT-PCR 2   92
cDNA source data(21)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(30) Genomic(3) cDNA(24) Primer pair(2) Other(1) Antibodies(1)
Microarray probesets(1)
Other database
links
EC 2.7.11.13
Ensembl Gene Model ENSMUSG00000078816
DoTS DT.111203025, DT.87068447
UniGene 7980
DFCI TC1586719, TC1662235, TC1769319
NIA Mouse Gene Index U219120
Entrez Gene 18752
International Mouse Knockout Project Status Prkcc
Protein
domains
InterPro ID Description
IPR000008 C2 calcium-dependent membrane targeting
IPR000719 Protein kinase, catalytic domain
IPR000961 AGC-kinase, C-terminal
IPR002219 Protein kinase C-like, phorbol ester/diacylglycerol binding
IPR002290 Serine/threonine-protein kinase domain
IPR008271 Serine/threonine-protein kinase, active site
IPR008973 C2 calcium/lipid-binding domain, CaLB
IPR011009 Protein kinase-like domain
IPR014375 Protein kinase C, alpha/beta/gamma types
IPR015745 Protein kinase C
IPR017441 Protein kinase, ATP binding site
IPR017442 Serine/threonine-protein kinase-like domain
IPR017892 Protein kinase, C-terminal
IPR018029 C2 membrane targeting protein
IPR020454 Diacylglycerol/phorbol-ester binding
IPR020477 C2 region
Graphical View of Protein Domain Structure
References
(Earliest) J:12309 Yang-Feng TL et al., "Protein kinase C genes in the mouse: Pkca maps to MMU 11 and Pkcc to MMU7." Cytogenet Cell Genet 1987;46():723
(Latest) J:152410 Komai T et al., "Expression of the mouse PR domain protein Prdm8 in the developing central nervous system." Gene Expr Patterns 2009 Oct;9(7):503-14
All references(102)
Other
accession IDs
MGD-MRK-13329

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/06/2010
MGI_4.32
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