About   Help   FAQ
Nodal Gene Detail
 Symbol
Name
ID
Nodal
nodal
MGI:97359


Nomenclature History
STS D10Mit112
Synonyms Tg.413d
Genetic Map
Chromosome 10
31.5 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 2)

Sequence Map
Chr10:60880720-60888086 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Nodal ± 2 cM)
Protein SuperFamily: Nodal protein
TreeFam: TF316134
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000021483 VEGA Gene Model | MGI Sequence Detail 7367 C57BL/6J ± Kb
transcript NM_013611 RefSeq | MGI Sequence Detail 2094 -
polypeptide P43021 UniProt | EBI | MGI Sequence Detail 354 Not Applicable
For the selected sequences
All sequences(16)
Alleles
and
phenotypes
All alleles(75) : Targeted, knock-out(9) Targeted, other(6) Gene trapped(59) Transgenic(1)
Homozygous null mutants fail to form a primitive streak, show placental defects and die at gastrulation. Hypomorphic mutants are defective in anterior-posterior, anterior-midline, and left-right body patterning, resulting in multiple organ defects.
Polymorphisms PCR(1) SNPs within 2kb(9 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (58 annotations)
Process anatomical structure formation involved in morphogenesis, anterior/posterior axis specification...
Component extracellular region, extracellular space...
Function cytokine activity, growth factor activity...
External Resources: FuncBase
Expression Literature Summary: (139 records)
Data Summary: Assays (25)    Results (184)    Tissues (40)    Images (88)
Theiler Stages: 4,6,7,8,9,10,11,12,13,19,20,21,22,23,24,25,28
  Assay Type Assays   Results
      RT-PCR 6   20
      In situ reporter (knock in) 2   36
      RNA in situ 17   128
cDNA source data(5)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(28) Genomic(3) cDNA(7) Primer pair(9) Other(9)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000037171
DoTS DT.87039260
Consensus CDS Project CCDS23878.1
DFCI TC1590164
NIA Mouse Gene Index U011564
Entrez Gene 18119
VEGA Gene Model OTTMUSG00000021483
International Mouse Knockout Project Status Nodal
Protein
domains
InterPro ID Description
IPR001111 Transforming growth factor beta (TGFb), N-terminal
IPR001839 Transforming growth factor beta
IPR015615 Transforming growth factor-beta-related
IPR017948 Transforming growth factor beta, conserved site
Graphical View of Protein Domain Structure
References
(Earliest) J:11389 Conlon FL et al., "A novel retrovirally induced embryonic lethal mutation in the mouse: assessment of the developmental fate of embryonic stem cells homozygous for the 413.d proviral integration." Development 1991 Apr;111(4):969-81
(Latest) J:155112 Tsiairis CD et al., "An Hh-dependent pathway in lateral plate mesoderm enables the generation of left/right asymmetry." Curr Biol 2009 Dec 1;19(22):1912-7
All references(177)
Other
accession IDs
MGD-MRK-12907, MGD-MRK-15051, MGI:98714

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
02/06/2010
MGI_4.32
Web browser compatibility
The Jackson Laboratory