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Ngfr Gene Detail
 Symbol
Name
ID
Ngfr
nerve growth factor receptor (TNFR superfamily, member 16)
MGI:97323


Nomenclature History
Synonyms LNGFR, p75, p75 neurotrophin receptor, p75NGFR, p75NTR, Tnfrsf16
Genetic Map
Chromosome 11
55.6 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 16)

Sequence Map
Chr11:95430132-95449049 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Ngfr ± 2 cM)
Protein SuperFamily: tumor necrosis factor receptor superfamily member 16
TreeFam: TF106466
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000001661 VEGA Gene Model | MGI Sequence Detail 18918 C57BL/6J ± Kb
transcript NM_033217 RefSeq | MGI Sequence Detail 3409 C57BL/6
polypeptide Q9Z0W1 UniProt | EBI | MGI Sequence Detail 417 Not Applicable
For the selected sequences
All sequences(19)
Alleles
and
phenotypes
All alleles(12) : Targeted, knock-out(2) Targeted, other(1) Gene trapped(9)
Homozygotes for targeted mutations exhibit increased perinatal lethality, skin abnormalities, growth retardation, reduced sensory nerve innervation, elevated pain threshold, ataxia, reduced sciatic nerve diameter, and blood vessel abnormalities.
Polymorphisms All PCR and RFLP(5) : PCR(2) RFLP(3) SNPs within 2kb(121 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(26)
Process apoptosis, axon guidance...
Component integral to membrane, membrane...
Function death receptor activity, nerve growth factor binding...
External Resources: MouseFunc
Expression Literature Summary: (150 records)
Data Summary: Assays (22)    Results (247)    Tissues (153)    Images (45)
Theiler Stages: 14,15,16,17,18,19,20,21,22,23,24,25,26,28
  Assay Type Assays   Results
      Northern blot 2   6
      RT-PCR 7   79
      RNA in situ 4   108
      Immunohistochemistry 7   45
      Western blot 2   9
cDNA source data(27)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Molecular
reagents
All nucleic(48) Genomic(3) cDNA(36) Primer pair(6) Other(3) Antibodies(6)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000000120
DoTS DT.484334
UniGene 283893
DFCI TC1580542
NIA Mouse Gene Index U033303
Entrez Gene 18053
VEGA Gene Model OTTMUSG00000001661
International Mouse Knockout Project Status Ngfr
Protein
domains
InterPro ID Description
IPR000488 Death
IPR001368 TNFR/CD27/30/40/95 cysteine-rich region
IPR011029 DEATH-like
Graphical View of Protein Domain Structure
References
(Earliest) J:14649 Sutter A et al., "Nerve growth factor receptors. Characterization of two distinct classes of binding sites on chick embryo sensory ganglia cells." J Biol Chem 1979 Jul 10;254(13):5972-82
(Latest) J:153654 Holm MM et al., "Mature BDNF, but not proBDNF, reduces excitability of fast-spiking interneurons in mouse dentate gyrus." J Neurosci 2009 Oct 7;29(40):12412-8
All references(320)
Other
accession IDs
MGD-MRK-12842

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory