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Mmp12 Gene Detail
 Symbol
Name
ID
Mmp12
matrix metallopeptidase 12
MGI:97005


Nomenclature History
Synonyms macrophage elastase, Mmel, MMP12
Genetic Map
Chromosome 9
1.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 11)

Sequence Map
Chr9:7344381-7369499 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Mmp12 ± 2 cM)
Protein SuperFamily: matrix metalloproteinase, stromelysin type
TreeFam: TF315428
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000027381 VEGA Gene Model | MGI Sequence Detail 25119 C57BL/6J ± Kb
transcript NM_008605 RefSeq | MGI Sequence Detail 3607 -
polypeptide P34960 UniProt | EBI | MGI Sequence Detail 473 Not Applicable
For the selected sequences
All sequences(69)
Alleles
and
phenotypes
All alleles(1) : Targeted, knock-out(1)
Polymorphisms RFLP(1) SNPs within 2kb(72 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(15)
Process metabolic process, proteolysis...
Component extracellular region, proteinaceous extracellular matrix...
Function calcium ion binding, hydrolase activity...
External Resources: MouseFunc
Expression Literature Summary: (3 records)
Data Summary: Assays (1)    Results (5)    Tissues (3)
Theiler Stages: 19,28
  Assay Type Assays   Results
      RT-PCR 1   5
cDNA source data(56)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(61) Genomic(4) cDNA(56) Primer pair(1)
Microarray probesets(2)
Other database
links
EC 3.4.24.65
Ensembl Gene Model ENSMUSG00000049723
DoTS DT.101135750, DT.101164333, DT.101312843, DT.101323612, DT.101346217, DT.101407043, DT.101407055, DT.101407068, DT.101407084, DT.97402107
UniGene 2055
DFCI TC1573624, TC1596006
NIA Mouse Gene Index U010022
Entrez Gene 17381
VEGA Gene Model OTTMUSG00000027381
International Mouse Knockout Project Status Mmp12
Protein
domains
InterPro ID Description
IPR000585 Hemopexin/matrixin
IPR001818 Peptidase M10A/M12B, matrixin/adamalysin
IPR002477 Peptidoglycan binding-like
IPR006025 Peptidase M, neutral zinc metallopeptidases, zinc-binding site
IPR006026 Peptidase, metallopeptidases
IPR016293 Peptidase M10A, matrix metallopeotidase
IPR018486 Hemopexin/matrixin, conserved site
IPR018487 Hemopexin/matrixin, repeat
Graphical View of Protein Domain Structure
References
(Earliest) J:11522 Denis M et al., "Tumor necrosis factor plays an essential role in determining hypersensitivity pneumonitis in a mouse model." Am J Respir Cell Mol Biol 1991 Nov;5(5):477-83
(Latest) J:150964 Houghton AM et al., "Macrophage elastase kills bacteria within murine macrophages." Nature 2009 Jul 30;460(7255):637-41
All references(51)
Other
accession IDs
MGD-MRK-12275, MGI:2143275

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory