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Tlr4 Gene Detail
 Symbol
Name
ID
Tlr4
toll-like receptor 4
MGI:96824


Nomenclature History
Synonyms lipopolysaccharide response, Lps, Rasl2-8
Genetic Map
Chromosome 4
33.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 30)

Sequence Map
Chr4:66488618-66591318 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Tlr4 ± 2 cM)
Protein SuperFamily: toll-like receptor, 1/2/4/6/10 types
TreeFam: TF351113
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000000227 VEGA Gene Model | MGI Sequence Detail 102701 C57BL/6J ± Kb
transcript NM_021297 RefSeq | MGI Sequence Detail 3847 C57BL/6
polypeptide Q9QUK6 UniProt | EBI | MGI Sequence Detail 835 Not Applicable
For the selected sequences
All sequences(24)
Alleles
and
phenotypes
All alleles(8) : Targeted, knock-out(1) Spontaneous(5) Chemically induced(2)
Homozygotes for spontaneous or targeted mutations are hyporesponsive to bacterial lipopolysaccharide and more susceptible to infection by gram negative bacteria.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (3)   Phenotype Images (1)  
Polymorphisms PCR(2) SNPs within 2kb(761 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(43)
Process activation of innate immune response, defense response to Gram-negative bacterium...
Component integral to membrane, intrinsic to membrane...
Function protein binding, receptor activity...
External Resources: MouseFunc
Expression Literature Summary: (4 records)
cDNA source data(23)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(30) Genomic(4) cDNA(24) Primer pair(2)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000039005
DoTS DT.482596, DT.94371279
UniGene 38049
PDB 2Z64
DFCI TC1581907
NIA Mouse Gene Index U004422
Entrez Gene 21898
VEGA Gene Model OTTMUSG00000000227
International Mouse Knockout Project Status Tlr4
Protein
domains
InterPro ID Description
IPR000157 Toll-Interleukin receptor
IPR000483 Cysteine-rich flanking region, C-terminal domain
IPR001611 Leucine-rich repeat
IPR017241 Toll-like receptor
Graphical View of Protein Domain Structure
References
(Earliest) J:5087 Sultzer BM, "Genetic control of leucocyte responses to endotoxin." Nature 1968 Sep 21;219(160):1253-4
(Latest) J:154197 Rodriguez S et al., "Dysfunctional expansion of hematopoietic stem cells and block of myeloid differentiation in lethal sepsis." Blood 2009 Nov 5;114(19):4064-76
All references(680)
Other
accession IDs
MGD-MRK-11879, MGD-MRK-26042

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory