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Lef1 Gene Detail
 Symbol
Name
ID
Lef1
lymphoid enhancer binding factor 1
MGI:96770


Nomenclature History
Synonyms Lef-1, lymphoid enhancer factor 1
Genetic Map
Chromosome 3
61.6 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 7)

Sequence Map
Chr3:130813389-130927274 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Lef1 ± 2 cM)
TreeFam: TF318448
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000020276 VEGA Gene Model | MGI Sequence Detail 113886 C57BL/6J ± Kb
transcript NM_010703 RefSeq | MGI Sequence Detail 2460 C57BL/6
polypeptide P27782 UniProt | EBI | MGI Sequence Detail 397 Not Applicable
For the selected sequences
All sequences(34)
Alleles
and
phenotypes
All alleles(5) : Targeted, knock-out(1) Targeted, other(1) Gene trapped(3)
Homozygotes for targeted null mutations lack teeth, mammary glands, hair, dentate gyrus granule cells, and submucosal glands, and die postnatally. Mutants' pro-B cells exhibit defects in proliferation and survival.
Polymorphisms RFLP(1) SNPs within 2kb(425 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(32)
Process cell development, chorio-allantoic fusion...
Component cytoplasm, nucleus...
Function chromatin binding, DNA bending activity...
External Resources: MouseFunc
Expression Literature Summary: (140 records)
Data Summary: Assays (26)    Results (276)    Tissues (190)    Images (95)
Theiler Stages: 1,2,3,4,5,11,12,13,17,18,19,20,21,22,23,24,25,26,28
  Assay Type Assays   Results
      RT-PCR 6   44
      RNA in situ 18   214
      Immunohistochemistry 2   18
cDNA source data(63)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Molecular
reagents
All nucleic(81) Genomic(1) cDNA(67) Primer pair(7) Other(6) Antibodies(2)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000027985
DoTS DT.101138159, DT.101307293, DT.101375180, DT.101721252, DT.533548, DT.94342537
UniGene 255219
PDB 2LEF
DFCI TC1578581, TC1586991, TC1587963, TC1631022, TC1704377, TC1762627
Entrez Gene 16842
VEGA Gene Model OTTMUSG00000020276
International Mouse Knockout Project Status Lef1
Protein
domains
InterPro ID Description
IPR000910 High mobility group, HMG1/HMG2
IPR009071 High mobility group, superfamily
IPR013558 CTNNB1 binding, N-teminal
Graphical View of Protein Domain Structure
References
(Earliest) J:10393 Mattei MG et al., "Chromosomal localization of the three members of the jun proto-oncogene family in mouse and man." Oncogene 1990 Jan;5(1):151-6
(Latest) J:153566 Fujimura N et al., "Spatial and temporal regulation of Wnt/beta-catenin signaling is essential for development of the retinal pigment epithelium." Dev Biol 2009 Oct 1;334(1):31-45
All references(180)
Other
accession IDs
MGD-MRK-11782, MGD-MRK-11783, MGI:2139722

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory