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Gdf5 Gene Detail
 Symbol
Name
ID
Gdf5
growth differentiation factor 5
MGI:95688


Nomenclature History
Synonyms bp, brp, cartilage-derived morphogenetic protein-1, CDMP-1
Genetic Map
Chromosome 2
90.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 16)

Sequence Map
Chr2:155766759-155771103 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human Gdf5 ± 2 cM)
Protein SuperFamily: bone morphogenetic protein
TreeFam: TF316134
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000015989 VEGA Gene Model | MGI Sequence Detail 4345 C57BL/6J ± Kb
transcript NM_008109 RefSeq | MGI Sequence Detail 2317 C57BL/6
polypeptide P43027 UniProt | EBI | MGI Sequence Detail 495 Not Applicable
For the selected sequences
All sequences(21)
Alleles
and
phenotypes
All alleles(8) : Gene trapped(1) Spontaneous(5) Chemically induced(2)
Homozygotes for null mutations exhibit slightly shortened long bones of the limbs, and drastically shortened bones of the feet, with some complete or partial fusions.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)   Phenotype Images (1)  
Polymorphisms All PCR and RFLP(3) : PCR(1) RFLP(2) SNPs within 2kb(42 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(15)
Process embryonic limb morphogenesis, forelimb morphogenesis...
Component extracellular region, extracellular space...
Function cytokine activity, growth factor activity...
External Resources: MouseFunc
Expression Literature Summary: (63 records)
Data Summary: Assays (13)    Results (79)    Tissues (60)    Images (28)
Theiler Stages: 19,20,21,22,23,24,25,26
  Assay Type Assays   Results
      RT-PCR 2   2
      RNA in situ 11   77
cDNA source data(9)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(17) Genomic(1) cDNA(10) Primer pair(3) Other(3)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000038259
DoTS DT.97410795
UniGene 4744
DFCI TC1594980, TC1611368, TC1658451, TC1668315
NIA Mouse Gene Index U023546, U369692
Entrez Gene 14563
VEGA Gene Model OTTMUSG00000015989
International Mouse Knockout Project Status Gdf5
Protein
domains
InterPro ID Description
IPR001111 Transforming growth factor beta (TGFb), N-terminal
IPR001839 Transforming growth factor beta
IPR002405 Inhibin, alpha subunit
IPR015615 Transforming growth factor-beta-related
IPR017948 Transforming growth factor beta, conserved site
Graphical View of Protein Domain Structure
References
(Earliest) J:19596 Landauer W, "Brachypodism - A recessive mutation of house-mice" J Hered 1952;43():293-8
(Latest) J:153743 Purcell P et al., "Temporomandibular joint formation requires two distinct hedgehog-dependent steps." Proc Natl Acad Sci U S A 2009 Oct 27;106(43):18297-302
All references(100)
Other
accession IDs
MGD-MRK-10041, MGD-MRK-1609, MGD-MRK-1633, MGI:88193

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory