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Cd247 Gene Detail
 Symbol
Name
ID
Cd247
CD247 antigen
MGI:88334


Nomenclature History
Synonyms 4930549J05Rik, CD3-eta, CD3-zeta, CD3-zeta/eta, Cd3h, Cd3z, CD3zeta, T3z, TCRk, Tcrz
Genetic Map
Chromosome 1
87.2 cM, cytoband G-H
Detailed Genetic Map ± 1 cM
 
Mapping data( 16)

Sequence Map
Chr1:167718812-167807407 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; rat; sheep    (Mammalian Orthology)
Comparative Map (Mouse/Human Cd247 ± 2 cM)
Protein SuperFamily: CD3, zeta type
TreeFam: TF330937
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000034863 VEGA Gene Model | MGI Sequence Detail 88596 C57BL/6J ± Kb
transcript NM_001113394 RefSeq | MGI Sequence Detail 5782 -
polypeptide P29020 UniProt | EBI | MGI Sequence Detail 206 Not Applicable
For the selected sequences
All sequences(38)
Alleles
and
phenotypes
All alleles(7) : Targeted, knock-out(5) Targeted, other(2)
Homozygotes for targeted null mutations exhibit greatly reduced numbers of CD4+CD8+ cells, and near absence of CD4+CD8-, CD4-CD8+ cells, and TCR expression in the thymus, but the presence of single positive T cells in lymph nodes.
Polymorphisms RFLP(7) SNPs within 2kb(676 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process cell surface receptor linked signal transduction, T cell receptor signaling pathway...
Component alpha-beta T cell receptor complex, cytoplasm...
Function protein binding, receptor activity...
External Resources: FuncBase
Expression Literature Summary: (3 records)
Data Summary: Assays (1)    Results (46)    Tissues (45)    Images (1)
Theiler Stages: 23,28
  Assay Type Assays   Results
      RT-PCR 1   46
cDNA source data(22)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(31) Genomic(6) cDNA(24) Primer pair(1)
Microarray probesets(5)
Other database
links
Ensembl Gene Model ENSMUSG00000005763
Consensus CDS Project CCDS15443.1
Entrez Gene 12503
VEGA Gene Model OTTMUSG00000034863
International Mouse Knockout Project Status Cd247
Protein
domains
InterPro ID Description
IPR003110 Phosphorylated immunoreceptor signaling ITAM
Graphical View of Protein Domain Structure
References
(Earliest) J:9058 Weissman AM et al., "Molecular cloning of the zeta chain of the T cell antigen receptor." Science 1988 Feb 26;239(4843):1018-21
(Latest) J:136685 Perruche S et al., "CD3-specific antibody-induced immune tolerance involves transforming growth factor-beta from phagocytes digesting apoptotic T cells." Nat Med 2008 May;14(5):528-35
All references(104)
Other
accession IDs
MGD-MRK-14699, MGD-MRK-14930, MGD-MRK-1855, MGD-MRK-1856, MGD-MRK-1857, MGI:1922598, MGI:2138612

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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