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Bmp5 Gene Detail
 Symbol
Name
ID
Bmp5
bone morphogenetic protein 5
MGI:88181


Nomenclature History
Genetic Map
Chromosome 9
42.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 76)

Sequence Map
Chr9:75623171-75748117 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Bmp5 ± 2 cM)
Protein SuperFamily: bone morphogenetic protein
TreeFam: TF316134
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000021529 VEGA Gene Model | MGI Sequence Detail 124947 C57BL/6J ± Kb
transcript NM_007555 RefSeq | MGI Sequence Detail 2528 C57BL/6
polypeptide P49003 UniProt | EBI | MGI Sequence Detail 452 Not Applicable
For the selected sequences
All sequences(31)
Alleles
and
phenotypes
All alleles(22) : Spontaneous(5) Chemically induced(2) Radiation induced(15)
Homozygous recessive mutants have shortened, slightly ruffled external ears due to a defective cartilage framework affecting the whole skeleton; a series of genomic deletions of the region cause embryonic lethality.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)   Phenotype Images (1)  
Polymorphisms SNPs within 2kb(468 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(13)
Process cartilage development, cell differentiation...
Component extracellular region, extracellular space...
Function cytokine activity, growth factor activity...
External Resources: MouseFunc
Expression Literature Summary: (32 records)
Data Summary: Assays (8)    Results (92)    Tissues (61)    Images (29)
Theiler Stages: 9,11,12,13,14,15,17,19,20,21,22,23,24,25,28
  Assay Type Assays   Results
      RT-PCR 4   11
      RNA in situ 3   69
      Northern blot 1   12
cDNA source data(31)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Molecular
reagents
All nucleic(43) Genomic(5) cDNA(32) Primer pair(3) Other(3)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000032179
DoTS DT.110614304, DT.91312064, DT.99849507
UniGene 473755
DFCI TC1586362, TC1598553, TC1598888
NIA Mouse Gene Index U010757
Entrez Gene 12160
VEGA Gene Model OTTMUSG00000021529
International Mouse Knockout Project Status Bmp5
Protein
domains
InterPro ID Description
IPR001111 Transforming growth factor beta (TGFb), N-terminal
IPR001839 Transforming growth factor beta
IPR015615 Transforming growth factor-beta-related
IPR017948 Transforming growth factor beta, conserved site
Graphical View of Protein Domain Structure
References
(Earliest) J:14849 Lynch CJ, "Short ears, an autosomal mutation in the house mouse" Am Naturalist 1921;55():421-426
(Latest) J:150516 Hu Z et al., "NDST1-dependent heparan sulfate regulates BMP signaling and internalization in lung development." J Cell Sci 2009 Apr 15;122(Pt 8):1145-54
All references(122)
Other
accession IDs
MGD-MRK-14349, MGD-MRK-1603, MGI:2143223

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory