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Impg2 Gene Detail
 Symbol
Name
ID
Impg2
interphotoreceptor matrix proteoglycan 2
MGI:3044955

Nomenclature History
Synonyms IPM200, PG10.2, Spacrcan
Genetic Map
Chromosome 16
Syntenic
 
Mapping data( 2)
Sequence Map
Chr16:56204426-56273869 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF331340
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000032947 VEGA Gene Model | MGI Sequence Detail 69444 C57BL/6J ± Kb
transcript NM_174876 RefSeq | MGI Sequence Detail 6992 -
polypeptide Q80XH2 UniProt | EBI | MGI Sequence Detail 1243 Not Applicable
For the selected sequences
All sequences(19)
Polymorphisms SNPs within 2kb(205 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process biological_process
Component integral to membrane, membrane...
Function heparin binding, hyaluronic acid binding...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (1)    Results (8)    Tissues (5)
Theiler Stages: 24,26,28
  Assay Type Assays   Results
      RNA in situ 1   8
cDNA source data(21)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(22) cDNA(22)
Microarray probesets(1)
Other database
links
Ensembl Gene Model ENSMUSG00000035270
DoTS DT.91326609, DT.91573830, DT.94177475
Consensus CDS Project CCDS37358.1
UniGene 151998
DFCI TC1587330, TC1593992, TC1600971
NIA Mouse Gene Index U017218
Entrez Gene 224224
VEGA Gene Model OTTMUSG00000032947
International Mouse Knockout Project Status Impg2
Protein
domains
InterPro ID Description
IPR000082 SEA
IPR000742 EGF-like, type 3
IPR013032 EGF-like region, conserved site
Graphical View of Protein Domain Structure
References
(Earliest) J:90863 Chen Q et al., "SPACRCAN in the interphotoreceptor matrix of the mouse retina: molecular, developmental and promoter analysis." Exp Eye Res 2003 Jan;76(1):1-14
(Latest) J:93300 Blackshaw S et al., "Genomic analysis of mouse retinal development." PLoS Biol 2004 Oct;2(9):E247
All references(3)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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