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Pak6 Gene Detail
 Symbol
Name
ID
Pak6
p21 protein (Cdc42/Rac)-activated kinase 6
MGI:2679420


Nomenclature History
Genetic Map
Chromosome 2
Syntenic
 
Mapping data( 1)
Sequence Map
Chr2:118489039-118523756 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF105352
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000015368 VEGA Gene Model | MGI Sequence Detail 34718 C57BL/6J ± Kb
transcript NM_001033254 RefSeq | MGI Sequence Detail 4137 C57BL/6
polypeptide Q3ULB5 UniProt | EBI | MGI Sequence Detail 682 Not Applicable
For the selected sequences
All sequences(26)
Alleles
and
phenotypes
All alleles(5) : Targeted, knock-out(1) Gene trapped(4)
Mice homozygous for a null allele do not exhibit any abnormal phenotype.
Polymorphisms SNPs within 2kb(235 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process protein amino acid phosphorylation
Component cellular_component
Function ATP binding, kinase activity...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (1)    Results (8)    Tissues (4)
Theiler Stages: 28
  Assay Type Assays   Results
      Northern blot 1   8
cDNA source data(18)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(20) Genomic(1) cDNA(19)
Microarray probesets(1)
Other database
links
EC 2.7.11.1
Ensembl Gene Model ENSMUSG00000074923
DoTS DT.101194875, DT.103562774, DT.97351478, DT.97399556
Consensus CDS Project CCDS16580.1
UniGene 241857
DFCI TC1582986, TC1667272
NIA Mouse Gene Index U002281
Entrez Gene 214230
VEGA Gene Model OTTMUSG00000015368
International Mouse Knockout Project Status Pak6
Protein
domains
InterPro ID Description
IPR000095 PAK-box/P21-Rho-binding
IPR000719 Protein kinase, catalytic domain
IPR002290 Serine/threonine-protein kinase domain
IPR011009 Protein kinase-like domain
IPR015750 Serine/threonine-protein kinase, Pak-related
IPR017441 Protein kinase, ATP binding site
IPR017442 Serine/threonine-protein kinase-like domain
Graphical View of Protein Domain Structure
References
(Earliest) J:85954 Qu J et al., "PAK4 kinase is essential for embryonic viability and for proper neuronal development." Mol Cell Biol 2003 Oct;23(20):7122-33
(Latest) J:141962 Nekrasova T et al., "Targeted disruption of the Pak5 and Pak6 genes in mice leads to deficits in learning and locomotion." Dev Biol 2008 Oct 1;322(1):95-108
All references(5)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/06/2010
MGI_4.32
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