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Wnt9a Gene Detail
 Symbol
Name
ID
Wnt9a
wingless-type MMTV integration site 9A
MGI:2446084


Nomenclature History
Synonyms Wnt14
Genetic Map
Chromosome 11
Syntenic
 
Mapping data( 1)
Sequence Map
Chr11:59120430-59147054 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Protein SuperFamily: int-1 transforming protein
TreeFam: TF105310
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000005790 VEGA Gene Model | MGI Sequence Detail 26625 C57BL/6J ± Kb
transcript NM_139298 RefSeq | MGI Sequence Detail 3318 -
polypeptide Q8R5M2 UniProt | EBI | MGI Sequence Detail 365 Not Applicable
For the selected sequences
All sequences(15)
Alleles
and
phenotypes
All alleles(6) : Targeted, knock-out(2) Targeted, other(4)
Polymorphisms SNPs within 2kb(128 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (16 annotations)
Process anatomical structure development, embryonic arm morphogenesis...
Component extracellular region, proteinaceous extracellular matrix...
Function signal transducer activity
External Resources: FuncBase
Expression Literature Summary: (25 records)
Data Summary: Assays (7)    Results (142)    Tissues (125)    Images (33)
Theiler Stages: 5,8,9,10,11,13,15,17,18,19,20,21,22,23,25,28
  Assay Type Assays   Results
      RT-PCR 2   17
      RNA in situ 5   125
cDNA source data(4)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(10) cDNA(4) Primer pair(4) Other(2)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000000126
DoTS DT.101721824
Consensus CDS Project CCDS36169.1
UniGene 218794
DFCI TC1582785, TC1599379
NIA Mouse Gene Index U012680
Entrez Gene 216795
VEGA Gene Model OTTMUSG00000005790
International Mouse Knockout Project Status Wnt9a
Protein
domains
InterPro ID Description
IPR005816 Secreted growth factor Wnt protein
IPR005817 Wnt superfamily
IPR013303 Wnt-14 protein
IPR018161 Secreted growth factor Wnt protein, conserved site
Graphical View of Protein Domain Structure
References
(Earliest) J:76632 Katoh M, "Molecular cloning and expression of mouse Wnt14, and structural comparison between mouse Wnt14-Wnt3a gene cluster and human WNT14-WNT3A gene cluster." Int J Mol Med 2002 Mar;9(3):221-7
(Latest) J:152099 Bi Y et al., "Wnt antagonist SFRP3 inhibits the differentiation of mouse hepatic progenitor cells." J Cell Biochem 2009 Jun 26;108(1):295-303
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory