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Gpnmb Gene Detail
 Symbol
Name
ID
Gpnmb
glycoprotein (transmembrane) nmb
MGI:1934765


Nomenclature History
Synonyms Dchil, Osteoactivin
Genetic Map
Chromosome 6
21.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 7)

Sequence Map
Chr6:48986612-49006778 bp, + strand
(From Ensembl annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Gpnmb ± 2 cM)
TreeFam: TF334865
Sequences
Representative Sequences Length Strain/Species Flank
genomic ENSMUSG00000029816 Ensembl Gene Model | MGI Sequence Detail 20167 C57BL/6J ± Kb
transcript NM_053110 RefSeq | MGI Sequence Detail 3798 C57BL/6
polypeptide Q99P91 UniProt | EBI | MGI Sequence Detail 574 Not Applicable
For the selected sequences
All sequences(79)
Alleles
and
phenotypes
All alleles(4) : Targeted, knock-out(1) Gene trapped(2) Spontaneous(1)
Homozygous mutants exhibit dispersed pigmentation of the iris, deterioration of the posterior iris epithelium and slit-like transillumination defects. The mutation contributes to glaucoma, especially in combination with the brown coat color mutation.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)   Phenotype Images (3)  
Polymorphisms SNPs within 2kb(111 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(8)
Process cell adhesion
Component cytoplasmic membrane-bounded vesicle, cytoplasmic vesicle...
Function heparin binding, integrin binding...
External Resources: MouseFunc
Expression Literature Summary: (2 records)
Data Summary: Assays (3)    Results (21)    Tissues (12)    Images (12)
Theiler Stages: 15,17,22,26,28
  Assay Type Assays   Results
      RNA in situ 3   21
cDNA source data(43)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Molecular
reagents
All nucleic(50) Genomic(4) cDNA(46)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000029816
DoTS DT.101127109, DT.101409461, DT.110499636, DT.97411220, DT.99866817
UniGene 302602
DFCI TC1573833, TC1590730, TC1693064
Entrez Gene 93695
International Mouse Knockout Project Status Gpnmb
Protein
domains
InterPro ID Description
IPR000601 PKD
Graphical View of Protein Domain Structure
References
(Earliest) J:54013 Chang B et al., "Interacting loci cause severe iris atrophy and glaucoma in DBA/2J mice." Nat Genet 1999 Apr;21(4):405-9
(Latest) J:153818 Chung JS et al., "Binding of DC-HIL to dermatophytic fungi induces tyrosine phosphorylation and potentiates antigen presenting cell function." J Immunol 2009 Oct 15;183(8):5190-8
All references(25)
Other
accession IDs
MGI:1336203, MGI:1933809

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory