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Syt5 Gene Detail
 Symbol
Name
ID
Syt5
synaptotagmin V
MGI:1926368


Nomenclature History
Synonyms SytIX
Genetic Map
Chromosome 7
cytoband A1
 
Mapping data( 1)
Sequence Map
Chr7:4491370-4498169 bp, - strand
(From Ensembl annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic; rat    (Mammalian Orthology)
Protein SuperFamily: B/K protein/synaptotagmin
TreeFam: TF315600
Sequences
Representative Sequences Length Strain/Species Flank
genomic ENSMUSG00000004961 Ensembl Gene Model | MGI Sequence Detail 6800 C57BL/6J ± Kb
transcript NM_016908 RefSeq | MGI Sequence Detail 1764 -
polypeptide Q9R0N5 UniProt | EBI | MGI Sequence Detail 386 Not Applicable
For the selected sequences
All sequences(10)
Alleles
and
phenotypes
All alleles(1) : Targeted, other(1)
Polymorphisms SNPs within 2kb(51 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(15)
Process transport
Component cell junction, cell soma...
Function calcium ion binding, metal ion binding...
External Resources: MouseFunc
Expression Literature Summary: (2 records)
Data Summary: Assays (1)    Results (92)    Tissues (92)    Images (11)
Theiler Stages: 22
  Assay Type Assays   Results
      RNA in situ 1   92
cDNA source data(14)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Molecular
reagents
All nucleic(15) cDNA(14) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000004961
DoTS DT.527097
UniGene 358663
DFCI TC1578504
NIA Mouse Gene Index U028088
Entrez Gene 53420
International Mouse Knockout Project Status Syt5
Protein
domains
InterPro ID Description
IPR000008 C2 calcium-dependent membrane targeting
IPR001565 Synaptotagmin
IPR018029 C2 membrane targeting protein
IPR020477 C2 region
Graphical View of Protein Domain Structure
References
(Earliest) J:1973 Willison K, "The mouse Brachyury gene and mesoderm formation." Trends Genet 1990 Apr;6(4):104-5
(Latest) J:140771 Vinet AF et al., "The exocytosis regulator synaptotagmin V controls phagocytosis in macrophages." J Immunol 2008 Oct 15;181(8):5289-95
All references(10)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory