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Ubash3b Gene Detail
 Symbol
Name
ID
Ubash3b
ubiquitin associated and SH3 domain containing, B
MGI:1920078

Nomenclature History
Synonyms 2810457I06Rik
Genetic Map
Chromosome 9
Syntenic
 
Mapping data( 2)
Sequence Map
Chr9:40819181-40969780 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF313334
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000025903 VEGA Gene Model | MGI Sequence Detail 150600 C57BL/6J ± Kb
transcript NM_176860 RefSeq | MGI Sequence Detail 3243 C57BL/6
polypeptide Q8BGG7 UniProt | EBI | MGI Sequence Detail 638 Not Applicable
For the selected sequences
All sequences(30)
Alleles
and
phenotypes 		All alleles(4) : Targeted, other(2) Gene trapped(2)
Polymorphisms SNPs within 2kb(929 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component cytoplasm, nucleus...
Function molecular_function
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (1)    Results (21)    Tissues (12)    Images (5)
Theiler Stages: 24,26,28
  Assay Type Assays   Results
      RNA in situ 1   21
cDNA source data(46)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(47) cDNA(47)
Microarray probesets(1)
Other database
links
Ensembl Gene Model ENSMUSG00000032020
DoTS DT.486564, DT.527588
Consensus CDS Project CCDS23085.1
UniGene 133615
PDB 2H0Q, 2IKQ
DFCI TC1576757, TC1596663, TC1620377
NIA Mouse Gene Index U030745
Entrez Gene 72828
VEGA Gene Model OTTMUSG00000025903
International Mouse Knockout Project Status Ubash3b
Protein
domains
InterPro ID Description
IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal
IPR001452 Src homology-3 domain
IPR009060 UBA-like
IPR013078 Phosphoglycerate mutase
IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J et al., "Functional annotation of a full-length mouse cDNA collection." Nature 2001 Feb 8;409(6821):685-90
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(5)
Other
accession IDs 		MGI:2143364
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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