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Acsl5 Gene Detail
 Symbol
Name
ID
Acsl5
acyl-CoA synthetase long-chain family member 5
MGI:1919129

Nomenclature History
Synonyms 1700030F05Rik, Facl5
Genetic Map
Chromosome 19
cytoband D2
 
Mapping data( 3)
Sequence Map
Chr19:55328426-55371112 bp, + strand
(From Ensembl annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Protein SuperFamily: human long-chain-fatty-acid-CoA ligase
TreeFam: TF313877
Sequences
Representative Sequences Length Strain/Species Flank
genomic ENSMUSG00000024981 Ensembl Gene Model | MGI Sequence Detail 42687 C57BL/6J ± Kb
transcript NM_027976 RefSeq | MGI Sequence Detail 3167 C57BL/6
polypeptide Q8JZR0 UniProt | EBI | MGI Sequence Detail 683 Not Applicable
For the selected sequences
All sequences(36)
Alleles
and
phenotypes 		All alleles(1) : Targeted, knock-out(1)
Polymorphisms SNPs within 2kb(241 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process fatty acid metabolic process, lipid metabolic process...
Component endoplasmic reticulum, integral to membrane...
Function ATP binding, catalytic activity...
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (1)    Results (6)    Tissues (2)
Theiler Stages: 24,28
  Assay Type Assays   Results
      RT-PCR 1   6
cDNA source data(161)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(163) cDNA(161) Primer pair(2)
Microarray probesets(2)
Pathways
fatty acid β-oxidation I
fatty acid β-oxidation II (core pathway)
fatty acid activation
Other database
links
EC 6.2.1.3
Ensembl Gene Model ENSMUSG00000024981
DoTS DT.494834, DT.87025632, DT.94363521, DT.97403291
Consensus CDS Project CCDS29908.1
UniGene 292056
DFCI TC1572352, TC1606149, TC1609266
NIA Mouse Gene Index U019587
Entrez Gene 433256
International Mouse Knockout Project Status Acsl5
Protein
domains
InterPro ID Description
IPR000873 AMP-dependent synthetase/ligase
IPR020845 AMP-binding, conserved site
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J et al., "Functional annotation of a full-length mouse cDNA collection." Nature 2001 Feb 8;409(6821):685-90
(Latest) J:151002 Pagliarini DJ et al., "A mitochondrial protein compendium elucidates complex I disease biology." Cell 2008 Jul 11;134(1):112-23
All references(10)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
Web browser compatibility 		The Jackson Laboratory