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Socs4 Gene Detail
 Symbol
Name
ID
Socs4
suppressor of cytokine signaling 4
MGI:1914546

Nomenclature History
Synonyms 3110032M18Rik, A730004F22Rik, Socs7
Genetic Map
Chromosome 14
Syntenic
 
Mapping data( 2)
Sequence Map
Chr14:47896606-47915773 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; rat    (Mammalian Orthology)
Protein SuperFamily: suppressor of cytokine signaling (SOCS) 4-7
TreeFam: TF321368
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000027545 VEGA Gene Model | MGI Sequence Detail 19168 C57BL/6J ± Kb
transcript NM_080843 RefSeq | MGI Sequence Detail 2154 -
polypeptide Q91ZA6 UniProt | EBI | MGI Sequence Detail 436 Not Applicable
For the selected sequences
All sequences(36)
Alleles
and
phenotypes 		All alleles(14) : Gene trapped(14)
Polymorphisms SNPs within 2kb(94 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process intracellular signaling cascade, modification-dependent protein catabolic process...
Function protein binding
External Resources: FuncBase
Expression cDNA source data(12)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(12) cDNA(12)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000048379
DoTS DT.101361241, DT.485406, DT.91358756, DT.94292637
Consensus CDS Project CCDS26985.1
DFCI TC1587741, TC1607655, TC1622614, TC1712910
NIA Mouse Gene Index U015543, U215352
Entrez Gene 67296
VEGA Gene Model OTTMUSG00000027545
International Mouse Knockout Project Status Socs4
Protein
domains
InterPro ID Description
IPR000980 SH2 motif
IPR001496 SOCS protein, C-terminal
Graphical View of Protein Domain Structure
References
(Earliest) J:60984 Ko MS et al., "Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development." Development 2000 Apr;127(8):1737-49
(Latest) J:126097 Cobellis G et al., "Tagging genes with cassette-exchange sites." Nucleic Acids Res 2005;33(4):e44
All references(5)
Other
accession IDs 		MGI:2145633, MGI:2145722, MGI:2145724
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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