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Apc2 Gene Detail
 Symbol
Name
ID
Apc2
adenomatosis polyposis coli 2
MGI:1346052

Nomenclature History
Synonyms APCL
Genetic Map
Chromosome 10
cytoband B5-C2
 
Mapping data( 3)
Sequence Map
Chr10:79758722-79781008 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF106496
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000000013 VEGA Gene Model | MGI Sequence Detail 22287 C57BL/6J ± Kb
transcript NM_011789 RefSeq | MGI Sequence Detail 9074 -
polypeptide Q9Z1K7 UniProt | EBI | MGI Sequence Detail 2274 Not Applicable
For the selected sequences
All sequences(31)
Alleles
and
phenotypes 		All alleles(2) : Targeted, other(2)
Polymorphisms SNPs within 2kb(63 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process Wnt receptor signaling pathway
Component catenin complex, cytoplasm...
Function beta-catenin binding, binding...
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (3)    Results (50)    Tissues (32)    Images (29)
Theiler Stages: 16,18,21,22,23,26,28
  Assay Type Assays   Results
      RNA in situ 2   41
      Northern blot 1   9
cDNA source data(135)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(137) Genomic(2) cDNA(135)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000020135
DoTS DT.101377161, DT.91333602, DT.99852230
Consensus CDS Project CCDS24016.1
UniGene 57247
DFCI TC1608415, TC1641718
NIA Mouse Gene Index U011748
Entrez Gene 23805
VEGA Gene Model OTTMUSG00000000013
International Mouse Knockout Project Status Apc2
Protein
domains
InterPro ID Description
IPR000225 Armadillo
IPR009223 APC cysteine-rich
IPR009224 SAMP
IPR009234 APC basic
IPR011989 Armadillo-like helical
IPR016024 Armadillo-type fold
Graphical View of Protein Domain Structure
References
(Earliest) J:57577 Bell SM et al., "Assignment of the murine adenomatous polyposis coli 2 (Apc2) gene to mouse chromosome band 10B5-C2 by in situ hybridisation." Cytogenet Cell Genet 1999;86(1):81-2
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(4)
Other
accession IDs 		MGI:2143692, MGI:2143960
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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