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Lat Gene Detail
 Symbol
Name
ID
Lat
linker for activation of T cells
MGI:1342293


Nomenclature History
Genetic Map
Chromosome 7
Syntenic
 
Mapping data( 2)
Sequence Map
Chr7:133507341-133513048 bp, - strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF337741
Sequences
Representative Sequences Length Strain/Species Flank
genomic 16797 NCBI Gene Model | MGI Sequence Detail 5708 C57BL/6J ± Kb
transcript NM_010689 RefSeq | MGI Sequence Detail 1260 -
polypeptide O54957 UniProt | EBI | MGI Sequence Detail 242 Not Applicable
For the selected sequences
All sequences(17)
Alleles
and
phenotypes
All alleles(15) : Targeted, knock-out(4) Targeted, other(10) Gene trapped(1)
Homozygotes for targeted null mutations exhibit blockage of intra-thymic lymphocyte development at the double negative stage and absence of mature peripheral T cells.
Polymorphisms SNPs within 2kb(60 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process cellular defense response, gene expression...
Component immunological synapse, integral to membrane...
Function receptor signaling protein activity
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (2)    Results (7)    Tissues (4)
Theiler Stages: 22,24,26,28
  Assay Type Assays   Results
      RT-PCR 2   7
cDNA source data(18)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(20) cDNA(19) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000030742
DoTS DT.97404642
Consensus CDS Project CCDS21825.1
UniGene 10280
DFCI TC1582106
NIA Mouse Gene Index U029239
Entrez Gene 16797
International Mouse Knockout Project Status Lat
Protein
domains
InterPro ID Description
IPR008359 Linker-for-activation of T cells (LAT) protein
Graphical View of Protein Domain Structure
References
(Earliest) J:49412 Zhang W et al., "LAT palmitoylation: its essential role in membrane microdomain targeting and tyrosine phosphorylation during T cell activation." Immunity 1998 Aug;9(2):239-46
(Latest) J:155482 Syed SN et al., "Both FcgammaRIV and FcgammaRIII are essential receptors mediating type II and type III autoimmune responses via FcRgamma-LAT-dependent generation of C5a." Eur J Immunol 2009 Dec;39(12):3343-56
All references(67)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory