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Ap3b1 Gene Detail
 Symbol
Name
ID
Ap3b1
adaptor-related protein complex 3, beta 1 subunit
MGI:1333879


Nomenclature History
Synonyms AP-3, beta3A, Hps2, recombination induced mutation 2, rim2
Genetic Map
Chromosome 13
47.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 35)

Sequence Map
Chr13:95128986-95336270 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Ap3b1 ± 2 cM)
Protein SuperFamily: adaptor protein complex AP-3, beta subunit
TreeFam: TF314605
Sequences
Representative Sequences Length Strain/Species Flank
genomic 11774 NCBI Gene Model | MGI Sequence Detail 207285 C57BL/6J ± Kb
transcript NM_009680 RefSeq | MGI Sequence Detail 4020 C57BL/6
polypeptide Q9Z1T1 UniProt | EBI | MGI Sequence Detail 1105 Not Applicable
For the selected sequences
All sequences(58)
Alleles
and
phenotypes
All alleles(44) : Targeted, knock-out(1) Targeted, other(1) Gene trapped(27) Spontaneous(14) Chemically induced(1)
Homozygous mutants exhibit hypopigmentation, elevated kidney levels of lysosomal enzymes, platelet storage pool deficiency, reduced ipsilateral projections from the retina to brain, reduced sensitivity of dark-adapted retina and shortened life span.
Associated Human Diseases (3)   Alleles Annotated to Human Diseases (2)   Phenotype Images (7)  
Polymorphisms PCR(4) SNPs within 2kb(1391 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(21)
Process antigen processing and presentation, antigen processing and presentation, exogenous lipid antigen via MHC class Ib...
Component cytoplasmic vesicle, Golgi apparatus...
Function binding, protein binding...
External Resources: MouseFunc
Expression cDNA source data(12)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(28) Genomic(12) cDNA(12) Primer pair(4)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000021686
DoTS DT.110961129, DT.110961141, DT.40187050, DT.534373
DFCI TC1574859, TC1595241, TC1657759
NIA Mouse Gene Index U015128
Entrez Gene 11774
International Mouse Knockout Project Status Ap3b1
Protein
domains
InterPro ID Description
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989 Armadillo-like helical
IPR016024 Armadillo-type fold
IPR017108 Adaptor protein complex AP-3, beta subunit
Graphical View of Protein Domain Structure
References
(Earliest) J:104625 Russell LB et al., "Steel (Sl) and Pearl (pe)" Mouse News Lett 1953;8():14
(Latest) J:139279 Chan WT et al., "Murine leukemia virus spreading in mice impaired in the biogenesis of secretory lysosomes and Ca2+-regulated exocytosis." PLoS ONE 2008;3(7):e2713
All references(71)
Other
accession IDs
MGD-MRK-13224, MGI:1197525, MGI:2145332, MGI:2145497, MGI:97536

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory