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Dkk1 Gene Detail
 Symbol
Name
ID
Dkk1
dickkopf homolog 1 (Xenopus laevis)
MGI:1329040


Nomenclature History
Synonyms mdkk-1
Genetic Map
Chromosome 19
cytoband C2
 
Mapping data( 1)
Sequence Map
Chr19:30620353-30624155 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; rat    (Mammalian Orthology)
Protein SuperFamily: Dickkopf-related protein Dkk-1/Dkk-2
TreeFam: TF330916
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000020350 VEGA Gene Model | MGI Sequence Detail 3803 C57BL/6J ± Kb
transcript NM_010051 RefSeq | MGI Sequence Detail 2245 C57BL/6
polypeptide O54908 UniProt | EBI | MGI Sequence Detail 272 Not Applicable
For the selected sequences
All sequences(14)
Alleles
and
phenotypes
All alleles(2) : Targeted, knock-out(1) Targeted, other(1)
Mice homozygous for a targeted mutation die at birth exhibiting absence of anterior head structures and forelimb malformations ranging from fusion of the distal-most limb elements to the appearance of ectopic preaxial and postaxial digits.
Polymorphisms SNPs within 2kb(40 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (17 annotations)
Process cell morphogenesis involved in differentiation, embryonic limb morphogenesis...
Component extracellular region, plasma membrane...
Function low-density lipoprotein receptor binding, protein binding...
External Resources: FuncBase
Expression Literature Summary: (82 records)
Data Summary: Assays (22)    Results (311)    Tissues (258)    Images (69)
Theiler Stages: 1,2,3,4,5,8,9,10,11,12,13,14,15,16,17,19,20,21,22,23,24,26,28
  Assay Type Assays   Results
      RT-PCR 5   41
      In situ reporter (knock in) 1   6
      RNA in situ 15   262
      Immunohistochemistry 1   2
cDNA source data(12)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(25) cDNA(13) Primer pair(9) Other(3) Antibodies(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000024868
DoTS DT.40172525
Consensus CDS Project CCDS29744.1
UniGene 214717
DFCI TC1584946
NIA Mouse Gene Index U038966
Entrez Gene 13380
VEGA Gene Model OTTMUSG00000020350
International Mouse Knockout Project Status Dkk1
Protein
domains
InterPro ID Description
IPR006796 Dickkopf, N-terminal cysteine-rich
Graphical View of Protein Domain Structure
References
(Earliest) J:51745 Glinka A et al., "Dickkopf-1 is a member of a new family of secreted proteins and functions in head induction." Nature 1998 Jan 22;391(6665):357-62
(Latest) J:155223 Suomalainen M et al., "Patterns of Wnt pathway activity in the mouse incisor indicate absence of Wnt/beta-catenin signaling in the epithelial stem cells." Dev Dyn 2009 Oct 5;239(1):364-372
All references(101)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
02/06/2010
MGI_4.32
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