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Coch Gene Detail
 Symbol
Name
ID
Coch
coagulation factor C homolog (Limulus polyphemus)
MGI:1278313


Nomenclature History
Synonyms Coch-5B2, D12H14S564E
Genetic Map
Chromosome 12
23.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 3)

Sequence Map
Chr12:52694442-52706760 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Coch ± 2 cM)
TreeFam: TF318242
Sequences
Representative Sequences Length Strain/Species Flank
genomic 12810 NCBI Gene Model | MGI Sequence Detail 12319 C57BL/6J ± Kb
transcript NM_007728 RefSeq | MGI Sequence Detail 2569 C57BL/6
polypeptide Q62507 UniProt | EBI | MGI Sequence Detail 552 Not Applicable
For the selected sequences
All sequences(21)
Alleles
and
phenotypes
All alleles(3) : Targeted, knock-out(1) Targeted, other(2)
Homozygotes for a point mutation have vestibular and hearing dysfunctions that worsen with age. Homozyogtes for a null allele have no abnormal phenotype.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)  
Polymorphisms RFLP(1) SNPs within 2kb(60 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(2)
Process sensory perception of sound
Component extracellular region
External Resources: MouseFunc
Expression Literature Summary: (3 records)
Data Summary: Assays (3)    Results (32)    Tissues (14)
Theiler Stages: 23,28
  Assay Type Assays   Results
      Western blot 1   2
      RT-PCR 1   2
      In situ reporter (knock in) 1   28
cDNA source data(14)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Molecular
reagents
All nucleic(16) cDNA(15) Primer pair(1) Antibodies(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000020953
DoTS DT.101379260, DT.50316207
UniGene 21325
DFCI TC1580499
NIA Mouse Gene Index U013931
Entrez Gene 12810
International Mouse Knockout Project Status Coch
Protein
domains
InterPro ID Description
IPR002035 von Willebrand factor, type A
IPR004043 LCCL
Graphical View of Protein Domain Structure
References
(Earliest) J:39118 Crozet F et al., "Cloning of the genes encoding two murine and human cochlear unconventional type I myosins." Genomics 1997 Mar 1;40(2):332-41
(Latest) J:140594 Robertson NG et al., "A targeted Coch missense mutation: a knock-in mouse model for DFNA9 late-onset hearing loss and vestibular dysfunction." Hum Mol Genet 2008 Nov 1;17(21):3426-34
All references(14)
Other
accession IDs
MGI:2145007

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory