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Eda Gene Detail
 Symbol
Name
ID
Eda
ectodysplasin-A
MGI:1195272


Nomenclature History
Synonyms Ed1, Eda-A1, Eda-A2, EDA1
Genetic Map
Chromosome X
37.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 94)

Sequence Map
ChrX:97170945-97596101 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Eda ± 2 cM)
TreeFam: TF332099
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000018058 VEGA Gene Model | MGI Sequence Detail 425157 C57BL/6J ± Kb
transcript NM_010099 RefSeq | MGI Sequence Detail 4955 C57BL/6
polypeptide O54693 UniProt | EBI | MGI Sequence Detail 391 Not Applicable
For the selected sequences
All sequences(48)
Alleles
and
phenotypes
All alleles(20) : Spontaneous(14) Chemically induced(2) Radiation induced(4)
Mutant hemizygous males and homozygous females have defects in ectodermal derivatives with absence of guard hairs, zigzags and tail hair, reduced eyelid opening, fewer vibrissae and defects of teeth and exocrine glands. Homozygous females are often sterile.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (2)   Phenotype Images (4)  
Polymorphisms SNPs within 2kb(803 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(23)
Process cell differentiation, cell-matrix adhesion...
Component apical part of cell, endoplasmic reticulum membrane...
Function tumor necrosis factor receptor binding
External Resources: MouseFunc
Expression Literature Summary: (19 records)
Data Summary: Assays (12)    Results (107)    Tissues (68)    Images (53)
Theiler Stages: 7,8,10,11,16,17,18,19,20,21,22,23,24,25,26,28
  Assay Type Assays   Results
      Western blot 2   4
      RT-PCR 1   1
      RNA in situ 7   94
      Northern blot 2   8
cDNA source data(22)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(41) Genomic(13) cDNA(24) Primer pair(1) Other(3) Antibodies(1)
Microarray probesets(6)
Other database
links
Ensembl Gene Model ENSMUSG00000059327
DoTS DT.101713740, DT.111023308, DT.111023309, DT.111023327, DT.55281652, DT.91323351, DT.94242826, DT.94242835
UniGene 328086
DFCI TC1587613, TC1596605, TC1597485, TC1599213
NIA Mouse Gene Index U020049
Entrez Gene 13607
VEGA Gene Model OTTMUSG00000018058
International Mouse Knockout Project Status Eda
Protein
domains
InterPro ID Description
IPR006052 Tumor Necrosis Factor
IPR008160 Collagen triple helix repeat
IPR008983 Tumour necrosis factor-like
Graphical View of Protein Domain Structure
References
(Earliest) J:78116 Falconer DS et al., "The environment in relation to selection for size in mice" J Genet 1952;51():67-80
(Latest) J:152818 Melnick M et al., "Salivary gland branching morphogenesis: a quantitative systems analysis of the Eda/Edar/NFkappaB paradigm." BMC Dev Biol 2009;9():32
All references(170)
Other
accession IDs
MGD-MRK-14700, MGI:98473

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory