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Cpt1b Gene Detail
 Symbol
Name
ID
Cpt1b
carnitine palmitoyltransferase 1b, muscle
MGI:1098297

Nomenclature History
Synonyms Cpt1, M-CPT I, M-CPTI
Genetic Map
Chromosome 15
52.6 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 4)

Sequence Map
Chr15:89246836-89255778 bp, - strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat; sheep    (Mammalian Orthology)
Comparative Map (Mouse/Human Cpt1b ± 2 cM)
TreeFam: TF313549
Sequences
Representative Sequences Length Strain/Species Flank
genomic 12895 NCBI Gene Model | MGI Sequence Detail 8943 C57BL/6J ± Kb
transcript NM_009948 RefSeq | MGI Sequence Detail 2894 C57BL/6
polypeptide Q924X2 UniProt | EBI | MGI Sequence Detail 772 Not Applicable
For the selected sequences
All sequences(18)
Alleles
and
phenotypes 		All alleles(1) : Targeted, knock-out(1)
Polymorphisms RFLP(1) SNPs within 2kb(11 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process fatty acid metabolic process, lipid metabolic process...
Component integral to membrane, membrane...
Function acyltransferase activity, carnitine O-palmitoyltransferase activity...
External Resources: FuncBase
Expression Literature Summary: (4 records)
Data Summary: Assays (3)    Results (22)    Tissues (14)    Images (2)
Theiler Stages: 1,2,3,4,5,24,26,28
  Assay Type Assays   Results
      RT-PCR 1   13
      Northern blot 2   9
cDNA source data(30)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(36) Genomic(3) cDNA(31) Primer pair(2)
Microarray probesets(2)
Other database
links
EC 2.3.1.21
Ensembl Gene Model ENSMUSG00000078937
Consensus CDS Project CCDS27749.1
UniGene 358582
DFCI TC1581482
Entrez Gene 12895
International Mouse Knockout Project Status Cpt1b
Protein
domains
InterPro ID Description
IPR000542 Acyltransferase ChoActase/COT/CPT
Graphical View of Protein Domain Structure
References
(Earliest) J:16140 Gelb BD, "Genomic structure of and a cardiac promoter for the mouse carnitine palmitoyltransferase II gene." Genomics 1993 Dec;18(3):651-5
(Latest) J:151002 Pagliarini DJ et al., "A mitochondrial protein compendium elucidates complex I disease biology." Cell 2008 Jul 11;134(1):112-23
All references(21)
Other
accession IDs 		MGD-MRK-2118
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
Web browser compatibility 		The Jackson Laboratory