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Ifnar2 Gene Detail
 Symbol
Name
ID
Ifnar2
interferon (alpha and beta) receptor 2
MGI:1098243


Nomenclature History
Synonyms Ifnar-2
Genetic Map
Chromosome 16
63.1 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 4)

Sequence Map
Chr16:91373028-91419696 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human Ifnar2 ± 2 cM)
TreeFam: TF335897
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000027167 VEGA Gene Model | MGI Sequence Detail 46669 C57BL/6J ± Kb
transcript NM_010509 RefSeq | MGI Sequence Detail 3051 C57BL/6
polypeptide O35664 UniProt | EBI | MGI Sequence Detail 513 Not Applicable
For the selected sequences
All sequences(52)
Alleles
and
phenotypes
All alleles(13) : Targeted, knock-out(3) Gene trapped(9) Chemically induced(1)
Mice with mutations of this gene have defects in immune responses involving, variously, NK cells, CD4+ and CD8+ T cells and B cells in response to induced and transplanted tumors, viruses, and double stranded DNA. These defects include diminished secretion of type I and type II interferons.
Polymorphisms SNPs within 2kb(76 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process blood coagulation, cell proliferation...
Component extracellular space, integral to membrane...
Function protein binding, receptor activity...
External Resources: FuncBase
Expression Literature Summary: (5 records)
Data Summary: Assays (7)    Results (114)    Tissues (85)    Images (3)
Theiler Stages: 13,15,16,17,20,22,23,24,26,28
  Assay Type Assays   Results
      Western blot 1   2
      RT-PCR 2   18
      RNA in situ 2   48
      Northern blot 2   46
cDNA source data(71)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(73) cDNA(71) Primer pair(2) Antibodies(1)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000022971
DoTS DT.101389482, DT.55219099, DT.97399262, DT.99668727
Consensus CDS Project CCDS28325.1
UniGene 6834
DFCI TC1578029, TC1583036, TC1698762, TC1704820
NIA Mouse Gene Index U017369
Entrez Gene 15976
VEGA Gene Model OTTMUSG00000027167
International Mouse Knockout Project Status Ifnar2
Protein
domains
InterPro ID Description
IPR001187 Tissue factor
IPR008957 Fibronectin, type III-like fold
IPR015373 Interferon alpha/beta receptor, beta chain
Graphical View of Protein Domain Structure
References
(Earliest) J:40624 Beebe AM et al., "Serial backcross mapping of multiple loci associated with resistance to Leishmania major in mice." Immunity 1997 May;6(5):551-7
(Latest) J:147136 Kumagai Y et al., "Cutting Edge: TLR-Dependent viral recognition along with type I IFN positive feedback signaling masks the requirement of viral replication for IFN-{alpha} production in plasmacytoid dendritic cells." J Immunol 2009 Apr 1;182(7):3960-4
All references(33)
Other
accession IDs
MGI:2146482

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory