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Ap3d1 Gene Detail
 Symbol
Name
ID
Ap3d1
adaptor-related protein complex 3, delta 1 subunit
MGI:107734


Nomenclature History
Synonyms Bolvr, mBLVR1
Genetic Map
Chromosome 10
43.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 3)

Sequence Map
Chr10:80169723-80204956 bp, - strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; goat; rat; sheep    (Mammalian Orthology)
Comparative Map (Mouse/Human Ap3d1 ± 2 cM)
Protein SuperFamily: adaptor protein complex AP-3, delta subunit
TreeFam: TF105666
Sequences
Representative Sequences Length Strain/Species Flank
genomic 11776 NCBI Gene Model | MGI Sequence Detail 35234 C57BL/6J ± Kb
transcript NM_007460 RefSeq | MGI Sequence Detail 4730 -
polypeptide O54774 UniProt | EBI | MGI Sequence Detail 1199 Not Applicable
For the selected sequences
All sequences(47)
Alleles
and
phenotypes
All alleles(10) : Targeted, knock-out(1) Gene trapped(7) Spontaneous(2)
Mutations show coat and eye color dilution, platelet defects, lysosomal abnormalities, inner ear degeneration and neurological defects. They model Hermansky-Pudlak storage pool deficiency syndrome.
Associated Human Diseases (2)   Alleles Annotated to Human Diseases (1)  
Polymorphisms PCR(1) SNPs within 2kb(72 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(17)
Process antigen processing and presentation, antigen processing and presentation, exogenous lipid antigen via MHC class Ib...
Component Golgi apparatus, membrane...
Function binding, protein binding...
External Resources: MouseFunc
Expression Literature Summary: (1 records)
cDNA source data(228)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Molecular
reagents
All nucleic(229) cDNA(228) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000020198
DoTS DT.101270359, DT.40166020, DT.535078, DT.94139287
UniGene 209294
DFCI TC1572774, TC1596807, TC1611998, TC1761622
NIA Mouse Gene Index U032021
Entrez Gene 11776
International Mouse Knockout Project Status Ap3d1
Protein
domains
InterPro ID Description
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR010474 Bovine leukaemia virus receptor
IPR011989 Armadillo-like helical
IPR016024 Armadillo-type fold
IPR017105 Adaptor protein complex AP-3, delta subunit
Graphical View of Protein Domain Structure
References
(Earliest) J:5511 Lane PW et al., "Mocha, a new coat color and behavior mutation on chromosome 10 of the mouse." J Hered 1974 Nov-Dec;65(6):362-4
(Latest) J:149430 Concepcion D et al., "Multipotent genetic suppression of retrotransposon-induced mutations by Nxf1 through fine-tuning of alternative splicing." PLoS Genet 2009 May;5(5):e1000484
All references(34)
Other
accession IDs
MGD-MRK-12227, MGD-MRK-36310, MGI:2143455, MGI:96979

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory