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Pctp Gene Detail
 Symbol
Name
ID
Pctp
phosphatidylcholine transfer protein
MGI:107375

Nomenclature History
Synonyms PC-TP, StarD2
Genetic Map
Chromosome 11
52.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 2)

Sequence Map
Chr11:89843979-89864208 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Pctp ± 2 cM)
Protein SuperFamily: phosphatidylcholine-transfer protein
TreeFam: TF320705
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000001285 VEGA Gene Model | MGI Sequence Detail 20230 C57BL/6J ± Kb
transcript NM_008796 RefSeq | MGI Sequence Detail 1971 C57BL/6
polypeptide P53808 UniProt | EBI | MGI Sequence Detail 214 Not Applicable
For the selected sequences
All sequences(26)
Alleles
and
phenotypes 		All alleles(2) : Targeted, knock-out(1) Spontaneous(1)
Polymorphisms PCR(1) SNPs within 2kb(89 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(5)
Process cholesterol metabolic process, lipid transport...
Component cytoplasm
Function lipid binding
External Resources: MouseFunc
Expression Literature Summary: (1 records)
Data Summary: Assays (4)    Results (38)    Tissues (32)
Theiler Stages: 16,20,21,22,23,24,25,26,28
  Assay Type Assays   Results
      RNase protection 4   38
cDNA source data(19)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents 		All nucleic(20) cDNA(19) Primer pair(1)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000020553
DoTS DT.101312202, DT.110530892, DT.60118093, DT.97398745
UniGene 5062
DFCI TC1583646, TC1598565, TC1652512
NIA Mouse Gene Index U033260
Entrez Gene 18559
VEGA Gene Model OTTMUSG00000001285
International Mouse Knockout Project Status Pctp
Protein
domains
InterPro ID Description
IPR002913 Lipid-binding START
Graphical View of Protein Domain Structure
References
(Earliest) J:33157 Geijtenbeek TB et al., "cDNA cloning and tissue-specific expression of the phosphatidylcholine transfer protein gene." Biochem J 1996 May 15;316(Pt 1):49-55
(Latest) J:138012 Scapa EF et al., "Regulation of energy substrate utilization and hepatic insulin sensitivity by phosphatidylcholine transfer protein/StarD2." FASEB J 2008 Jul;22(7):2579-90
All references(15)
Other
accession IDs 		MGD-MRK-35842
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/20/2009
MGI_4.31
Web browser compatibility 		The Jackson Laboratory